Basic Information
Locus ID:
Oco01G013120
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 17952223 | 17955866 | - | Oco01G013120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.15 | 58,213.01 Da | 35.63 | 95.16 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 276 | 534 | 6.6E-37 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 3 | 62 | 1.6E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 250 | 534 | 1.66E-52 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 3 | 98 | 3.23E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 348 | 537 | 1.4E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3 | 115 | 4.9E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 242 | 346 | 2.5E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 268 | 537 | 26.053921 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_052140042.1 | LRR receptor-like serine/threonine-protein kinase FEI 1 [Oryza glaberrima] | 0 |
| Q9LK03 | Proline-rich receptor-like protein kinase PERK2 OS=Arabidopsis thaliana OX=3702 GN=PERK2 PE=2 SV=3 | 0 | |
| TrEMBL | J3L1A8 | Protein kinase domain-containing protein OS=Oryza brachyantha OX=4533 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology