Basic Information
Locus ID:
Oco01G012300
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 16952598 | 16961857 | - | Oco01G012300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.17 | 70,408.10 Da | 33.37 | 89.13 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 339 | 603 | 2.06448E-89 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 152 | 245 | 7.3E-12 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 52 | 128 | 9.8E-11 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 336 | 601 | 2.8E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 318 | 629 | 5.13E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 300 | 408 | 1.2E-32 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 148 | 248 | 1.0E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 27 | 130 | 2.6E-16 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 410 | 615 | 6.5E-60 | - |
| SMART | SM00220 | serkin_6 | 333 | 603 | 5.4E-33 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 142 | 248 | 15.321129 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 333 | 620 | 38.110222 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 26 | 130 | 17.575104 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 454 | 466 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 339 | 361 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_015612494.1 | cysteine-rich receptor-like protein kinase 2 [Oryza sativa Japonica Group] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0JJX8 | Cysteine-rich receptor-like protein kinase 2 OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology