Basic Information
Locus ID:
Oco01G009530
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Short Name:
NIN1
Description:
Alkaline and neutral invertase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 10855061 | 10859030 | + | Oco01G009530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 69,508.65 Da | 53.38 | 82.54 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12899 | Alkaline and neutral invertase | 138 | 579 | 1.3E-220 | IPR024746 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 134 | 583 | 1.08E-56 | IPR008928 |
| Gene3D | G3DSA:1.50.10.10 | - | 164 | 572 | 5.5E-16 | IPR012341 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 134 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56560.1 | Plant neutral invertase family protein. | 0 |
| RefSeq | XP_006645848.2 | neutral/alkaline invertase 1, mitochondrial-like [Oryza brachyantha] | 0 |
| Q10MC0 | Neutral/alkaline invertase 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=NIN1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0JHZ0 | Alkaline/neutral invertase OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology