Basic Information
Locus ID:
Oco01G007460
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 7700529 | 7701847 | + | Oco01G007460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 41,802.19 Da | 51.15 | 87.80 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 19 | 317 | 8.2E-30 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 323 | 4.54E-52 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 112 | 327 | 1.2E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 111 | 1.1E-11 | - |
| SMART | SM00220 | serkin_6 | 16 | 321 | 1.6E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 16 | 321 | 28.951391 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 154 | 166 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 22 | 51 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 400 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G23170.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_040375823.1 | serine/threonine-protein kinase-like protein At5g23170 [Oryza brachyantha] | 0 |
| Q9FMY3 | Serine/threonine-protein kinase-like protein At5g23170 OS=Arabidopsis thaliana OX=3702 GN=At5g23170 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1CCM7 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_001611 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology