Basic Information
Locus ID:
Oco01G006320
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 6519609 | 6523373 | + | Oco01G006320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 107,601.51 Da | 31.80 | 104.13 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 63 | 2.6E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 143 | 202 | 3.5E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 693 | 919 | 4.9E-43 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 377 | 1.7E-57 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 269 | 591 | 7.3E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 681 | 970 | 2.73E-71 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 674 | 777 | 3.7E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 182 | 3.1E-35 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 778 | 990 | 3.4E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 622 | 2.6E-88 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 183 | 283 | 2.5E-28 | IPR032675 |
| SMART | SM00220 | serkin_6 | 691 | 992 | 4.6E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 691 | 982 | 37.544865 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 822 | 834 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_052162141.1 | receptor-like protein kinase HSL1 [Oryza glaberrima] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D3ELL0 | Protein kinase domain-containing protein OS=Oryza barthii OX=65489 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology