Basic Information
Locus ID:
Oco01G006070
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Phosphatidylinositol 3- and 4-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 6267877 | 6271375 | - | Oco01G006070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 62,797.69 Da | 40.97 | 87.93 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 50 | 109 | 1.3E-13 | IPR000626 |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 261 | 512 | 2.7E-50 | IPR000403 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 49 | 113 | 2.3E-13 | IPR029071 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 398 | 562 | 1.22E-9 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 47 | 117 | 4.1E-13 | - |
| SMART | SM00213 | ubq_7 | 38 | 108 | 1.5E-6 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 15 | 112 | 14.490739 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46500.1 | phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. | 0 |
| RefSeq | XP_015631743.1 | phosphatidylinositol 4-kinase gamma 2 isoform X1 [Oryza sativa Japonica Group] | 0 |
| Q6K881 | Phosphatidylinositol 4-kinase gamma 4 OS=Oryza sativa subsp. japonica OX=39947 GN=PI4KG4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0MTL8 | 1-phosphatidylinositol 4-kinase OS=Oryza rufipogon OX=4529 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Oryza coarctata | 2 | Oco01G006070, Oco02G006120 |