HalophFGD

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Basic Information
Locus ID: Oco01G005420
Species & Taxonomic ID: Oryza coarctata & 77588
Genome Assembly: GCA_030770085.1
Description: Serine threonine-protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
LG01 5579196 5580281 - Oco01G005420
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.08 21,525.21 Da 44.52 71.41 -0.35
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 46 166 7.1E-7 -
Best hit
Source Best Hit ID Description E-value
TAIR AT4G00340.2 - 0
RefSeq XP_015621848.1 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Oryza sativa Japonica Group] 0
Swiss-Prot Q39203 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS=Arabidopsis thaliana OX=3702 GN=SD22 PE=1 SV=1 0
TrEMBL A0A0E0JFS6 Receptor-like serine/threonine-protein kinase OS=Oryza punctata OX=4537 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_1AG0001340, gene-QOZ80_1BG0049790
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.3HG0247430.1.CDS1 ...
HORVU.MOREX.r3.3HG0247440.1.CDS1, HORVU.MOREX.r3.3HG0247450.1
Poaceae Lolium multiflorum 2 gene-QYE76_018716, gene-QYE76_051398
Poaceae Oryza coarctata 5 Oco01G005400, Oco01G005420, Oco01G005430, Oco02G005460 ...
Oco02G005490
Poaceae Oryza sativa 5 LOC_Os01g12400.2, LOC_Os01g12410.1, LOC_Os01g12420.1 ...
LOC_Os01g12430.1, LOC_Os05g16320.1
Poaceae Paspalum vaginatum 2 gene-BS78_02G290200, gene-BS78_03G011100
Poaceae Puccinellia tenuiflora 1 Pt_Chr0204928
Poaceae Sporobolus alterniflorus 7 Chr02G021780, Chr03G000310, Chr05G012620, Chr08G005420 ...
Chr08G005450, Chr17G017470, Chr21G015970
Poaceae Thinopyrum elongatum 5 Tel2E01G036500, Tel2E01G036600, Tel3E01G266100 ...
Tel3E01G266200, Tel3E01G266500
Poaceae Triticum dicoccoides 5 gene_TRIDC3AG019800, gene_TRIDC3AG019840 ...
gene_TRIDC3BG024990, gene_TRIDC3BG025000, gene_TRIDC3BG025020
Poaceae Triticum aestivum 7 TraesCS3A02G148200.1.cds1, TraesCS3A02G148300.1.cds1 ...
TraesCS3A02G148600.1.cds1, TraesCS3B02G175400.1.cds1, TraesCS3B02G175500.1.cds1, TraesCS3D02G156200.1, TraesCS3D02G156300.1
Poaceae Zea mays 3 Zm00001eb105820_P001, Zm00001eb338920_P001 ...
Zm00001eb380540_P001
Poaceae Zoysia japonica 1 nbis-gene-24315
Poaceae Zoysia macrostachya 1 Zma_g9539
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.