Basic Information
Locus ID:
Oco01G005400
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 5563825 | 5566064 | - | Oco01G005400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.78 | 79,582.73 Da | 44.53 | 93.69 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 25 | 142 | 8.94411E-18 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 303 | 373 | 2.59848E-19 | - |
| Pfam | PF00069 | Protein kinase domain | 559 | 683 | 2.3E-10 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 314 | 357 | 8.8E-10 | IPR003609 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 438 | 550 | 4.3E-21 | IPR001245 |
| Pfam | PF00954 | S-locus glycoprotein domain | 230 | 285 | 5.2E-6 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 70 | 165 | 6.0E-17 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 85 | 160 | 4.19E-16 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 419 | 686 | 1.88E-58 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 511 | 691 | 6.3E-37 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 12 | 139 | 2.2E-11 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 403 | 510 | 5.6E-27 | - |
| SMART | SM00108 | blect_4 | 24 | 142 | 4.5E-14 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 1 | 714 | 2.5E-183 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 18 | 139 | 11.980323 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 307 | 374 | 8.771868 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 436 | 689 | 22.280144 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 442 | 465 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_052146965.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Oryza glaberrima] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0D9Y5E6 | Non-specific serine/threonine protein kinase OS=Oryza glumipatula OX=40148 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology