Basic Information
Locus ID:
Oco01G005370
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 5528697 | 5531655 | + | Oco01G005370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 20,543.11 Da | 34.90 | 73.14 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 1 | 85 | 6.52816E-18 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 111 | 185 | 9.2E-10 | IPR001245 |
| Pfam | PF08276 | PAN-like domain | 12 | 67 | 5.7E-11 | IPR003609 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 106 | 185 | 8.26E-16 | IPR011009 |
| SUPERFAMILY | SSF57414 | Hairpin loop containing domain-like | 12 | 67 | 4.71E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 83 | 183 | 4.8E-25 | - |
| SMART | SM00473 | ntp_6 | 10 | 84 | 0.0022 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 109 | 188 | 10.280378 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 3 | 85 | 9.256813 | IPR003609 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_040375901.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Oryza brachyantha] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0JFQ8 | Receptor-like serine/threonine-protein kinase OS=Oryza punctata OX=4537 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Oco01G005370.