Basic Information
Locus ID:
Oco01G003740
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 3600892 | 3609511 | - | Oco01G003740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 62,791.86 Da | 39.55 | 74.13 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 120 | 493 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 321 | 429 | 2.0E-20 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 448 | 492 | 7.8E-6 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 123 | 273 | 6.1E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 105 | 480 | 1.03E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 208 | 446 | 1.9E-69 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 113 | 207 | 1.8E-33 | - |
| SMART | SM00220 | serkin_6 | 122 | 429 | 1.4E-103 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 430 | 494 | 1.5E-6 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 122 | 429 | 46.915707 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 430 | 502 | 12.846769 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 241 | 253 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 128 | 151 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 503 | 550 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33080.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_015699272.2 | serine/threonine-protein kinase 38 [Oryza brachyantha] | 0 |
| Q15208 | Serine/threonine-protein kinase 38 OS=Homo sapiens OX=9606 GN=STK38 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0P0UZ08 | Os01g0186700 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0186700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology