HalophFGD

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Basic Information
Locus ID: Oco01G002310
Species & Taxonomic ID: Oryza coarctata & 77588
Genome Assembly: GCA_030770085.1
Description: Protein of unknown function (DUF1668)
Maps and Mapping Data
Chromosome Start End Strand ID
LG01 2275863 2276510 - Oco01G002310
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.19 23,906.70 Da 51.13 70.70 -0.23
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF07893 Protein of unknown function (DUF1668) 7 197 2.8E-56 IPR012871
SUPERFAMILY SSF50965 Galactose oxidase, central domain 29 136 9.55E-5 IPR011043
Best hit
Source Best Hit ID Description E-value
RefSeq XP_052141594.1 uncharacterized protein LOC127761354 [Oryza glaberrima] 0
TrEMBL A0A0E0BXF2 Uncharacterized protein OS=Oryza meridionalis OX=40149 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH03.3014, AH07.3729, BH01.3192, BH01.5005, BH07.3553 ...
CH07.3622, CH07.3623
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_2BG0204150, gene-QOZ80_2BG0205010 ...
gene-QOZ80_2BG0205430, gene-QOZ80_3AG0230710, gene-QOZ80_3AG0232630, gene-QOZ80_3BG0297150, gene-QOZ80_5AG0366800
Poaceae Hordeum vulgare 4 HORVU.MOREX.r3.5HG0462090.1.CDS1 ...
HORVU.MOREX.r3.5HG0473320.1.CDS1, HORVU.MOREX.r3.5HG0487520.1.CDS1, HORVU.MOREX.r3.6HG0558090.1.CDS1
Poaceae Lolium multiflorum 11 gene-QYE76_001971, gene-QYE76_002059, gene-QYE76_006007 ...
gene-QYE76_020283, gene-QYE76_020292, gene-QYE76_020323, gene-QYE76_020506, gene-QYE76_049928, gene-QYE76_059716, gene-QYE76_059718, gene-QYE76_065978
Poaceae Oryza coarctata 5 Oco01G002310, Oco01G005560, Oco02G005640, Oco04G002260 ...
Oco06G026770
Poaceae Oryza sativa 12 LOC_Os01g12330.1, LOC_Os02g04900.1, LOC_Os02g05070.1 ...
LOC_Os02g05080.1, LOC_Os02g05120.1, LOC_Os02g05190.1, LOC_Os02g05350.1, LOC_Os02g05360.1, LOC_Os02g05430.1, LOC_Os02g05810.2, LOC_Os03g08690.1, LOC_Os03g13984.1
Poaceae Paspalum vaginatum 4 gene-BS78_04G301100, gene-BS78_04G304500 ...
gene-BS78_04G305700, gene-BS78_10G161300
Poaceae Puccinellia tenuiflora 6 Pt_Chr0202690, Pt_Chr0202744, Pt_Chr0202745, Pt_Chr0202746 ...
Pt_Chr0202801, Pt_Chr0207429
Poaceae Sporobolus alterniflorus 5 Chr01G017040, Chr06G000270, Chr0G032880, Chr15G001470 ...
Chr18G011610
Poaceae Thinopyrum elongatum 3 Tel2E01G250300, Tel3E01G567200, Tel3E01G567700
Poaceae Triticum dicoccoides 1 gene_TRIDC3BG025440
Poaceae Triticum aestivum 17 TraesCS1A02G191000.1.cds1, TraesCS1A02G293700.1.cds1 ...
TraesCS1B02G302800.1.cds1, TraesCS1D02G298200.1.cds1, TraesCS2A02G113300.1.cds1, TraesCS2A02G113400.1.cds1, TraesCS2A02G118900.1.cds1, TraesCS2D02G113800.1.cds1, TraesCS2D02G116400.1.cds1, TraesCS3A02G436700.1.cds1, TraesCS3B02G387100.1.cds1, TraesCS3B02G387300.1.cds1, TraesCS3B02G402300.1, TraesCS3D02G363300.1, TraesCS5A02G038600.1.cds1, TraesCS5B02G040200.1.cds1, TraesCS6B02G142300.1.cds1
Poaceae Zoysia japonica 4 nbis-gene-25157, nbis-gene-58900, nbis-gene-59033 ...
nbis-gene-8560
Poaceae Zoysia macrostachya 2 Zma_g28580, Zma_g28590
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