Basic Information
Locus ID:
Oco01G001180
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Cation efflux family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 1189016 | 1199713 | - | Oco01G001180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.88 | 44,497.89 Da | 43.65 | 92.96 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01545 | Cation efflux family | 106 | 295 | 5.4E-32 | IPR002524 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 312 | 376 | 2.7E-13 | IPR027470 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 98 | 297 | 2.48E-41 | IPR027469 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 300 | 376 | 4.97E-16 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 101 | 295 | 2.1E-42 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 305 | 377 | 1.3E-17 | IPR036837 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 105 | 376 | 3.5E-31 | IPR002524 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79520.3 | - | 0 |
| RefSeq | XP_052139937.1 | metal tolerance protein 7 isoform X1 [Oryza glaberrima] | 0 |
| Q9LDU0 | Metal tolerance protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6G1E1I9 | ZT_dimer domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_023573 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology