Basic Information
Locus ID:
Oco01G000380
Species & Taxonomic ID:
Oryza coarctata & 77588
Genome Assembly:
GCA_030770085.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 310676 | 315356 | - | Oco01G000380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 41,921.02 Da | 61.24 | 87.45 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 72 | 317 | 2.5558E-124 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 64 | 316 | 2.2E-65 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 56 | 349 | 3.24E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 51 | 145 | 2.2E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 146 | 329 | 7.8E-61 | - |
| SMART | SM00220 | serkin_6 | 63 | 321 | 1.5E-66 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 63 | 321 | 43.255001 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 185 | 197 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 225 | 235 | 2.1E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 179 | 197 | 2.1E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 288 | 310 | 2.1E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 244 | 266 | 2.1E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 141 | 154 | 2.1E-20 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62400.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015692513.1 | serine/threonine/tyrosine-protein kinase HT1-like [Oryza brachyantha] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CFJ2 | Protein kinase domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_012646 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology