HalophFGD

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Basic Information
Locus ID: Lb8G36618
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Description: Brca1-associated
Maps and Mapping Data
Chromosome Start End Strand ID
chr08 116038449 116039591 - Lb8G36618
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.84 12,499.06 Da 41.22 88.62 -0.49
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF05212 Protein of unknown function (DUF707) 7 30 8.0E-6 IPR007877
Pfam PF05212 Protein of unknown function (DUF707) 7 30 8.0E-6 IPR007877
Coils Coil Coil 79 99 - -
Coils Coil Coil 79 99 - -
KEGG Pathway
KO Term:
K10632 (BRCA1-associated protein [EC:2.3.2.27])
Pathway:
ko04014 (Ras signaling pathway) map04014 (Ras signaling pathway)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_034698836.1 BRAP2 RING ZnF UBP domain-containing protein 2 [Vitis riparia] 0
TrEMBL A0A7C9DV76 UBP-type domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Plumbaginaceae Limonium bicolor 5 Lb1G08037, Lb3G19896, Lb4G25131, Lb5G27843, Lb8G36618
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.