Basic Information
Locus ID:
Lb8G35943
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Di-glucose binding within endoplasmic reticulum
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 40571370 | 40581629 | + | Lb8G35943 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 78,972.46 Da | 39.17 | 95.38 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 400 | 659 | 3.71447E-91 | - |
| CDD | cd14066 | STKc_IRAK | 400 | 659 | 3.71447E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 396 | 661 | 1.0E-49 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 235 | 334 | 3.9E-22 | IPR021720 |
| Pfam | PF11721 | Malectin domain | 235 | 334 | 3.9E-22 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 396 | 661 | 1.0E-49 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 377 | 663 | 9.17E-80 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 377 | 663 | 9.17E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 375 | 469 | 1.1E-33 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 223 | 339 | 5.8E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 470 | 680 | 7.8E-56 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 470 | 680 | 7.8E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 375 | 469 | 1.1E-33 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 223 | 339 | 5.8E-20 | - |
| SMART | SM00220 | serkin_6 | 394 | 670 | 1.3E-35 | IPR000719 |
| SMART | SM00220 | serkin_6 | 394 | 670 | 1.3E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 394 | 668 | 39.580158 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 394 | 668 | 39.580158 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 400 | 422 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 514 | 526 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 514 | 526 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 400 | 422 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G29750.1 | receptor-like kinase in flowers 1. Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains. | 0 |
| RefSeq | XP_034698931.1 | probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X2 [Vitis riparia] | 0 |
| Q9FXF2 | Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana OX=3702 GN=RKF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J4ZAU4 | Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_018173 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology