halophFGD

Basic Information

Locus ID: Lb8G35848

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: Kelch motif

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr08	31268449	31269626	-	Lb8G35848

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.74	40,934.88 Da	32.50	95.48	-0.04

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12937	F-box-like	24	66	7.5E-6	IPR001810
Pfam	PF01344	Kelch motif	127	163	2.1E-7	IPR006652
Pfam	PF12937	F-box-like	24	66	7.5E-6	IPR001810
Pfam	PF01344	Kelch motif	127	163	2.1E-7	IPR006652
Pfam	PF01344	Kelch motif	176	212	1.8E-5	IPR006652
Pfam	PF01344	Kelch motif	176	212	1.8E-5	IPR006652
SUPERFAMILY	SSF117281	Kelch motif	120	316	1.44E-24	IPR015915
SUPERFAMILY	SSF81383	F-box domain	22	65	1.27E-6	IPR036047
SUPERFAMILY	SSF117281	Kelch motif	120	316	1.44E-24	IPR015915
SUPERFAMILY	SSF81383	F-box domain	22	65	1.27E-6	IPR036047
Gene3D	G3DSA:2.120.10.80	-	95	246	6.0E-20	IPR015915
Gene3D	G3DSA:2.120.10.80	-	95	246	6.0E-20	IPR015915

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT4G29370.1	Galactose oxidase/kelch repeat superfamily protein.	0
RefSeq	XP_043722617.1	F-box/kelch-repeat protein SKIP6 [Telopea speciosissima]	0
Swiss-Prot	Q9M0E6	F-box/kelch-repeat protein At4g29370 OS=Arabidopsis thaliana OX=3702 GN=At4g29370 PE=4 SV=1	0
TrEMBL	A0A118K566	F-box domain, cyclin-like protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_013091 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Plumbaginaceae	Limonium bicolor	4	Lb2G10118, Lb8G35845, Lb8G35847, Lb8G35848