Basic Information
Locus ID:
Lb8G35819
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
CRK1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 29152025 | 29156923 | - | Lb8G35819 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 65,493.14 Da | 53.86 | 82.37 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 130 | 392 | 9.22401E-131 | - |
| CDD | cd05117 | STKc_CAMK | 130 | 392 | 9.22401E-131 | - |
| Pfam | PF00069 | Protein kinase domain | 131 | 393 | 6.4E-71 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 131 | 393 | 6.4E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 422 | 575 | 1.89E-16 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 128 | 436 | 1.62E-83 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 128 | 436 | 1.62E-83 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 422 | 575 | 1.89E-16 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 112 | 216 | 8.1E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 217 | 416 | 2.0E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 417 | 575 | 1.6E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 217 | 416 | 2.0E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 112 | 216 | 8.1E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 417 | 575 | 1.6E-15 | - |
| SMART | SM00220 | serkin_6 | 131 | 393 | 2.5E-97 | IPR000719 |
| SMART | SM00220 | serkin_6 | 131 | 393 | 2.5E-97 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 131 | 393 | 50.816689 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 435 | 470 | 8.376417 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 435 | 470 | 8.376417 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 131 | 393 | 50.816689 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 255 | 267 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 137 | 163 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 137 | 163 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 255 | 267 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56760.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_030925938.1 | CDPK-related kinase 1-like isoform X4 [Quercus lobata] | 0 |
| Q9LET1 | CDPK-related kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CRK7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9HQ73 | Protein kinase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41696 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology