Basic Information
Locus ID:
Lb8G35786
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 25640789 | 25642347 | + | Lb8G35786 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 45,002.58 Da | 33.87 | 78.26 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 281 | 394 | 8.20962E-25 | IPR033734 |
| CDD | cd09612 | Jacalin | 21 | 152 | 6.06834E-38 | IPR033734 |
| CDD | cd09612 | Jacalin | 21 | 152 | 6.06834E-38 | IPR033734 |
| CDD | cd09612 | Jacalin | 281 | 394 | 8.20962E-25 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 313 | 394 | 2.8E-13 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 21 | 152 | 5.7E-30 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 313 | 394 | 2.8E-13 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 21 | 152 | 5.7E-30 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 270 | 393 | 2.75E-27 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 11 | 151 | 2.22E-39 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 270 | 393 | 2.75E-27 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 11 | 151 | 2.22E-39 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 256 | 394 | 1.2E-29 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 256 | 394 | 1.2E-29 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 3 | 152 | 9.3E-49 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 3 | 152 | 9.3E-49 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 281 | 395 | 2.3E-15 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 21 | 153 | 6.7E-35 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 281 | 395 | 2.3E-15 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 21 | 153 | 6.7E-35 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 10 | 153 | 43.339222 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 270 | 395 | 22.16099 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 10 | 153 | 43.339222 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 270 | 395 | 22.16099 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.2 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_031268962.1 | jacalin-related lectin 3-like isoform X1 [Pistacia vera] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J1A9Q0 | jacalin-related lectin 3 isoform X1 OS=Herrania umbratica OX=108875 GN=LOC110416249 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology