Basic Information
Locus ID:
Lb8G35703
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ and MATH domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 16473822 | 16475559 | + | Lb8G35703 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 33,037.70 Da | 30.38 | 86.23 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 31 | 74 | 1.98945E-7 | IPR002083 |
| CDD | cd00121 | MATH | 31 | 74 | 1.98945E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 115 | 219 | 8.7E-25 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 115 | 219 | 8.7E-25 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 107 | 220 | 5.49E-27 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 28 | 103 | 1.22E-16 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 28 | 103 | 1.22E-16 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 107 | 220 | 5.49E-27 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 97 | 238 | 1.8E-33 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 97 | 238 | 1.8E-33 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 29 | 74 | 1.1E-7 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 29 | 74 | 1.1E-7 | IPR008974 |
| SMART | SM00225 | BTB_4 | 125 | 223 | 7.3E-23 | IPR000210 |
| SMART | SM00225 | BTB_4 | 125 | 223 | 7.3E-23 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 125 | 188 | 17.72752 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 30 | 71 | 9.319348 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 125 | 188 | 17.72752 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 30 | 71 | 9.319348 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.2 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_034704587.1 | BTB/POZ and MATH domain-containing protein 3 isoform X2 [Vitis riparia] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8YYP7 | BTB/POZ and MATH domain-containing protein 3-like (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||