Basic Information
Locus ID:
Lb7G35479
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
leucine-rich repeat receptor-like protein kinase At5g49770
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 270233420 | 270243553 | + | Lb7G35479 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 104,410.52 Da | 34.25 | 89.13 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 638 | 904 | 5.9596E-93 | - |
| CDD | cd14066 | STKc_IRAK | 638 | 904 | 5.9596E-93 | - |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 262 | 297 | 3.2E-6 | IPR025875 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 262 | 297 | 3.2E-6 | IPR025875 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 60 | 9.7E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 634 | 899 | 3.7E-46 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 634 | 899 | 3.7E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 60 | 9.7E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 58 | 398 | 2.55E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 618 | 926 | 1.48E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 58 | 398 | 2.55E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 618 | 926 | 1.48E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 708 | 919 | 3.8E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 281 | 417 | 1.8E-15 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 605 | 707 | 7.9E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 180 | 1.9E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 280 | 8.5E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 708 | 919 | 3.8E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 180 | 1.9E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 280 | 8.5E-20 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 605 | 707 | 7.9E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 281 | 417 | 1.8E-15 | IPR032675 |
| SMART | SM00220 | serkin_6 | 632 | 905 | 5.5E-39 | IPR000719 |
| SMART | SM00220 | serkin_6 | 632 | 905 | 5.5E-39 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 263 | 285 | 8.004581 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 632 | 905 | 38.746254 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 632 | 905 | 38.746254 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 263 | 285 | 8.004581 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 638 | 660 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 638 | 660 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 752 | 764 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 752 | 764 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 912 | 935 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 909 | 935 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 912 | 935 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 909 | 935 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_019266169.1 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Nicotiana attenuata] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2R6Q1N3 | Leucine-rich repeat receptor-like protein kinase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc24282 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology