Basic Information
Locus ID:
Lb7G35034
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Domain of Unknown Function (DUF913)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 195866997 | 195873809 | + | Lb7G35034 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.54 | 59,396.04 Da | 41.75 | 78.70 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 356 | 540 | 2.4E-52 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 356 | 540 | 2.4E-52 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 372 | 540 | 1.16E-56 | IPR035983 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 372 | 540 | 1.16E-56 | IPR035983 |
| Gene3D | G3DSA:3.30.2160.10 | Hect, E3 ligase catalytic domain | 350 | 418 | 1.5E-28 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 419 | 453 | 1.5E-28 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 454 | 540 | 4.9E-30 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 419 | 453 | 1.5E-28 | - |
| Gene3D | G3DSA:3.30.2160.10 | Hect, E3 ligase catalytic domain | 350 | 418 | 1.5E-28 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 454 | 540 | 4.9E-30 | - |
| SMART | SM00119 | hect_3 | 188 | 540 | 2.2E-27 | IPR000569 |
| SMART | SM00119 | hect_3 | 188 | 540 | 2.2E-27 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 383 | 540 | 50.770588 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 383 | 540 | 50.770588 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 48 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70320.1 | ubiquitin-protein ligase 2. encodes a ubiquitin-protein ligase-like protein containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_047150055.1 | E3 ubiquitin-protein ligase UPL1-like [Vigna umbellata] | 0 |
| Q8H0T4 | E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana OX=3702 GN=UPL2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2K3NB06 | E3 ubiquitin-protein ligase upl2-like protein OS=Trifolium pratense OX=57577 GN=L195_g023495 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||