Basic Information
Locus ID:
Lb7G34766
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 163942832 | 163944245 | - | Lb7G34766 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 33,648.65 Da | 70.70 | 94.55 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 198 | 287 | 4.12E-10 | IPR038765 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 198 | 287 | 4.12E-10 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 179 | 298 | 1.9E-6 | - |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 179 | 298 | 1.9E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 2 | Sgl83028, Sgl83243 |
| Asteraceae | Flaveria trinervia | 1 | Ftri11G21610 |
| Plumbaginaceae | Limonium bicolor | 205 | Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... |