Basic Information
Locus ID:
Lb7G34709
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ and MATH domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 157263501 | 157267859 | + | Lb7G34709 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 44,778.52 Da | 37.65 | 87.00 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14736 | BACK_AtBPM-like | 300 | 359 | 1.05592E-25 | IPR034090 |
| CDD | cd14736 | BACK_AtBPM-like | 300 | 359 | 1.05592E-25 | IPR034090 |
| CDD | cd00121 | MATH | 28 | 161 | 9.22486E-28 | IPR002083 |
| CDD | cd00121 | MATH | 28 | 161 | 9.22486E-28 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 183 | 299 | 3.65573E-53 | - |
| CDD | cd18280 | BTB_POZ_BPM_plant | 183 | 299 | 3.65573E-53 | - |
| Pfam | PF00651 | BTB/POZ domain | 188 | 300 | 1.2E-26 | IPR000210 |
| Pfam | PF00917 | MATH domain | 44 | 161 | 1.9E-4 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 188 | 300 | 1.2E-26 | IPR000210 |
| Pfam | PF00917 | MATH domain | 44 | 161 | 1.9E-4 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 24 | 163 | 3.92E-34 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 176 | 300 | 1.45E-30 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 176 | 300 | 1.45E-30 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 24 | 163 | 3.92E-34 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 173 | 296 | 4.0E-34 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 173 | 296 | 4.0E-34 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 26 | 166 | 2.0E-31 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 26 | 166 | 2.0E-31 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 301 | 381 | 8.5E-18 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 301 | 381 | 8.5E-18 | - |
| SMART | SM00061 | math_3 | 32 | 144 | 8.8E-13 | IPR002083 |
| SMART | SM00225 | BTB_4 | 197 | 302 | 3.0E-26 | IPR000210 |
| SMART | SM00061 | math_3 | 32 | 144 | 8.8E-13 | IPR002083 |
| SMART | SM00225 | BTB_4 | 197 | 302 | 3.0E-26 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 197 | 264 | 18.575481 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 27 | 161 | 23.58713 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 197 | 264 | 18.575481 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 27 | 161 | 23.58713 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.1 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_027104374.1 | BTB/POZ and MATH domain-containing protein 3-like isoform X1 [Coffea arabica] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J5AT98 | BTB/POZ and MATH domain-containing protein 3-like OS=Nyssa sinensis OX=561372 GN=F0562_031634 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology