HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Lb7G34680
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Short Name: BADH2
Description: Belongs to the aldehyde dehydrogenase family
Maps and Mapping Data
Chromosome Start End Strand ID
chr07 152866111 152871134 + Lb7G34680
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.27 22,954.07 Da 56.42 96.23 -0.04
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF53720 ALDH-like 61 110 8.21E-6 IPR016161
SUPERFAMILY SSF53720 ALDH-like 61 110 8.21E-6 IPR016161
Gene3D G3DSA:3.40.605.10 Aldehyde Dehydrogenase; Chain A, domain 1 53 113 1.8E-7 IPR016162
Gene3D G3DSA:3.40.605.10 Aldehyde Dehydrogenase; Chain A, domain 1 53 113 1.8E-7 IPR016162
MobiDBLite mobidb-lite consensus disorder prediction 128 147 - -
MobiDBLite mobidb-lite consensus disorder prediction 122 170 - -
MobiDBLite mobidb-lite consensus disorder prediction 128 147 - -
MobiDBLite mobidb-lite consensus disorder prediction 122 170 - -
Gene Ontology
Molecular Function:
GO:0016491 (oxidoreductase activity)
KEGG Pathway
KO Term:
K00130 (betaine-aldehyde dehydrogenase [EC:1.2.1.8])
Pathway:
ko00260 (Glycine, serine and threonine metabolism) map00260 (Glycine, serine and threonine metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)
Module:
M00555 (Betaine biosynthesis, choline => betaine)
Reaction:
R02565 (Betaine aldehyde + NAD+ + H2O <=> Betaine + NADH + 2 H+) R02566 (Betaine aldehyde + NADP+ + H2O <=> Betaine + NADPH + 2 H+)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G74920.1 aldehyde dehydrogenase 10A8. Arabidopsis thaliana similar to betaine aldehyde dehydrogenase 0
RefSeq XP_021733695.1 betaine aldehyde dehydrogenase, chloroplastic [Chenopodium quinoa] 0
Swiss-Prot O04895 Betaine aldehyde dehydrogenase, chloroplastic OS=Amaranthus hypochondriacus OX=28502 GN=BADH4 PE=3 SV=1 0
TrEMBL A0A7G5M2T5 Betaine aldehyde dehydrogenase protein OS=Calligonum mongolicum OX=661978 PE=2 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 2 Sgl13602, Sgl18789
Plumbaginaceae Limonium bicolor 2 Lb1G01130, Lb7G34680
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.