Basic Information
Locus ID:
Lb7G34631
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Mitochondrial protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 148181483 | 148185867 | + | Lb7G34631 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.51 | 62,284.82 Da | 30.56 | 79.22 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 107 | 216 | 2.9E-14 | - |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 107 | 216 | 2.9E-14 | - |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 507 | 560 | 3.79E-7 | IPR012337 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 507 | 560 | 3.79E-7 | IPR012337 |
| Gene3D | G3DSA:2.30.30.30 | - | 62 | 113 | 2.1E-8 | IPR014722 |
| Gene3D | G3DSA:3.30.420.10 | - | 492 | 563 | 1.4E-5 | IPR036397 |
| Gene3D | G3DSA:2.30.30.30 | - | 62 | 113 | 2.1E-8 | IPR014722 |
| Gene3D | G3DSA:3.30.420.10 | - | 492 | 563 | 1.4E-5 | IPR036397 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 268 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042982037.1 | uncharacterized protein LOC122311522 isoform X1 [Carya illinoinensis] | 0 |
| TrEMBL | A0A834CW47 | gag_pre-integrs domain-containing protein OS=Juglans regia OX=51240 GN=F2P56_016028 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology