halophFGD

Basic Information

Locus ID: Lb7G34621

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: transposon protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr07	147457555	147461133	+	Lb7G34621

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.09	43,290.79 Da	57.61	59.49	-0.82

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	340	361	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	362	381	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	246	391	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	205	225	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	143	186	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	246	334	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	143	186	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	362	381	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	340	361	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	246	391	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	205	225	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	246	334	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_048493933.1	uncharacterized protein LOC125494420 [Beta vulgaris subsp. vulgaris]	0
TrEMBL	A0A803LK06	beta-galactosidase OS=Chenopodium quinoa OX=63459 PE=3 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	12	gene_11363, gene_14535, gene_15408, gene_22663, gene_25519 ... gene_25548, gene_25895, gene_4293, gene_7724, gene_8506, gene_8884, gene_9673
Amaranthaceae	Atriplex hortensis	3	Ah003715, Ah007052, Ah037022
Amaranthaceae	Salicornia bigelovii	43	Sbi_jg14545, Sbi_jg16734, Sbi_jg25736, Sbi_jg27296 ... Sbi_jg27496, Sbi_jg28264, Sbi_jg31840, Sbi_jg32201, Sbi_jg33024, Sbi_jg33025, Sbi_jg33340, Sbi_jg33415, Sbi_jg36423, Sbi_jg36424, Sbi_jg36425, Sbi_jg36974, Sbi_jg36975, Sbi_jg41359, Sbi_jg41360, Sbi_jg41836, Sbi_jg41853, Sbi_jg44230, Sbi_jg44592, Sbi_jg44594, Sbi_jg4618, Sbi_jg47772, Sbi_jg48469, Sbi_jg48630, Sbi_jg50062, Sbi_jg50347, Sbi_jg53713, Sbi_jg53806, Sbi_jg56783, Sbi_jg56787, Sbi_jg56861, Sbi_jg56995, Sbi_jg56996, Sbi_jg57313, Sbi_jg5801, Sbi_jg60107, Sbi_jg60108, Sbi_jg60472, Sbi_jg9872
Amaranthaceae	Salicornia europaea	44	Seu_jg10099, Seu_jg10376, Seu_jg10425, Seu_jg10537 ... Seu_jg10589, Seu_jg10685, Seu_jg10749, Seu_jg12732, Seu_jg12733, Seu_jg13260, Seu_jg13557, Seu_jg14710, Seu_jg1503, Seu_jg17149, Seu_jg17150, Seu_jg17688, Seu_jg17923, Seu_jg1937, Seu_jg22012, Seu_jg22544, Seu_jg22603, Seu_jg22604, Seu_jg24291, Seu_jg24617, Seu_jg24761, Seu_jg27629, Seu_jg27668, Seu_jg27854, Seu_jg27857, Seu_jg3817, Seu_jg3966, Seu_jg4158, Seu_jg4254, Seu_jg4255, Seu_jg4258, Seu_jg4594, Seu_jg6964, Seu_jg6967, Seu_jg7124, Seu_jg7125, Seu_jg7208, Seu_jg7249, Seu_jg7408, Seu_jg7906
Amaranthaceae	Suaeda aralocaspica	28	GOSA_00003916, GOSA_00009010, GOSA_00014468, GOSA_00015280 ... GOSA_00016667, GOSA_00016996, GOSA_00018082, GOSA_00020611, GOSA_00020945, GOSA_00021170, GOSA_00021449, GOSA_00021605, GOSA_00021942, GOSA_00022002, GOSA_00022100, GOSA_00022189, GOSA_00022795, GOSA_00023211, GOSA_00023212, GOSA_00024132, GOSA_00025157, GOSA_00025730, GOSA_00025988, GOSA_00026679, GOSA_00027311, GOSA_00029154, GOSA_00029236, GOSA_00029451
Amaranthaceae	Suaeda glauca	22	Sgl03949, Sgl03953, Sgl09073, Sgl13640, Sgl14611, Sgl18821 ... Sgl19779, Sgl20462, Sgl21870, Sgl27145, Sgl27146, Sgl36035, Sgl41298, Sgl65118, Sgl65121, Sgl65630, Sgl69538, Sgl69540, Sgl69926, Sgl79183, Sgl79353, Sgl81639
Amaranthaceae	Chenopodium album	2	gene:ENSEOMG00000009169, gene:ENSEOMG00000043177
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.5BG0012130, CQ.Regalona.r1.6BG0015370 ... CQ.Regalona.r1.7BG0019450, CQ.Regalona.r1.8BG0011260, CQ.Regalona.r1.9AG0008120
Arecaceae	Phoenix dactylifera	6	gene-LOC120104662, gene-LOC120104664, gene-LOC120105012 ... gene-LOC120107031, gene-LOC120108354, gene-LOC120110484
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate08g03110
Plumbaginaceae	Limonium bicolor	1	Lb7G34621
Poaceae	Paspalum vaginatum	1	gene-BS78_09G094000
Poaceae	Triticum dicoccoides	1	gene_TRIDC2AG017150
Portulacaceae	Portulaca oleracea	5	evm.TU.LG07.1296, evm.TU.LG08.476, evm.TU.LG11.534 ... evm.TU.LG11.847, evm.TU.LG20.1312
Solanaceae	Lycium barbarum	1	gene-LOC132609421