Basic Information
Locus ID:
Lb7G34303
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 126288166 | 126315765 | + | Lb7G34303 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 72,846.85 Da | 38.65 | 75.07 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 239 | 373 | 7.36405E-27 | IPR033734 |
| CDD | cd09612 | Jacalin | 22 | 153 | 5.42579E-40 | IPR033734 |
| CDD | cd09612 | Jacalin | 378 | 457 | 3.14696E-23 | IPR033734 |
| CDD | cd09612 | Jacalin | 22 | 153 | 5.42579E-40 | IPR033734 |
| CDD | cd09612 | Jacalin | 378 | 457 | 3.14696E-23 | IPR033734 |
| CDD | cd09612 | Jacalin | 239 | 373 | 7.36405E-27 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 22 | 153 | 1.4E-27 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 239 | 373 | 6.3E-21 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 239 | 373 | 6.3E-21 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 22 | 153 | 1.4E-27 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 378 | 457 | 4.5E-14 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 378 | 457 | 4.5E-14 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 228 | 372 | 1.11E-31 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 12 | 153 | 2.09E-38 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 378 | 457 | 1.44E-19 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 228 | 372 | 1.11E-31 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 378 | 457 | 1.44E-19 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 12 | 153 | 2.09E-38 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 215 | 374 | 6.8E-40 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 4 | 153 | 7.9E-48 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 215 | 374 | 6.8E-40 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 4 | 153 | 7.9E-48 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 375 | 459 | 6.8E-23 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 375 | 459 | 6.8E-23 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 239 | 374 | 1.4E-22 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 22 | 154 | 1.5E-31 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 375 | 458 | 0.0037 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 22 | 154 | 1.5E-31 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 239 | 374 | 1.4E-22 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 375 | 458 | 0.0037 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 228 | 374 | 38.358868 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 228 | 374 | 38.358868 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 379 | 458 | 18.118555 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 11 | 154 | 43.489292 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 11 | 154 | 43.489292 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 379 | 458 | 18.118555 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 643 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 644 | 658 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 568 | 588 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 643 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 568 | 588 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 671 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 671 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 644 | 658 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.3 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_028212873.1 | jacalin-related lectin 3-like [Glycine soja] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | K7MQ91 | Jacalin-related lectin 3-like OS=Glycine max OX=3847 GN=100775599 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology