Basic Information
Locus ID:
Lb7G34030
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 115346044 | 115355781 | - | Lb7G34030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 49,321.60 Da | 40.94 | 76.47 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 46 | 372 | 4.64583E-161 | - |
| CDD | cd14136 | STKc_SRPK | 46 | 372 | 4.64583E-161 | - |
| Pfam | PF00069 | Protein kinase domain | 57 | 372 | 2.3E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 57 | 372 | 2.3E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 53 | 382 | 1.57E-52 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 53 | 382 | 1.57E-52 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 111 | 372 | 2.3E-88 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 43 | 142 | 2.3E-88 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 43 | 142 | 2.3E-88 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 111 | 372 | 2.3E-88 | - |
| SMART | SM00220 | serkin_6 | 57 | 372 | 9.9E-23 | IPR000719 |
| SMART | SM00220 | serkin_6 | 57 | 372 | 9.9E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 57 | 372 | 17.319111 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 57 | 372 | 17.319111 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 63 | 86 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 63 | 86 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 409 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_027365639.1 | serine/threonine-protein kinase SRPK isoform X2 [Abrus precatorius] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A834SL87 | Serine/threonine-protein kinase SRPK-like OS=Senna tora OX=362788 GN=G2W53_043471 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology