Basic Information
Locus ID:
Lb7G34026
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 115288334 | 115298798 | + | Lb7G34026 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.10 | 56,650.48 Da | 38.72 | 81.59 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 34 | 438 | 0.0 | - |
| CDD | cd14136 | STKc_SRPK | 34 | 438 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 34 | 165 | 4.8E-19 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 272 | 438 | 2.7E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 272 | 438 | 2.7E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 34 | 165 | 4.8E-19 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 34 | 448 | 1.52E-79 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 34 | 448 | 1.52E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 108 | 440 | 1.3E-78 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 108 | 440 | 1.3E-78 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 29 | 107 | 7.7E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 29 | 107 | 7.7E-26 | - |
| SMART | SM00220 | serkin_6 | 34 | 438 | 1.3E-50 | IPR000719 |
| SMART | SM00220 | serkin_6 | 34 | 438 | 1.3E-50 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 25 | 438 | 29.912504 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 25 | 438 | 29.912504 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 152 | 164 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 152 | 164 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 475 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 475 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_010243134.1 | PREDICTED: serine/threonine-protein kinase SRPK-like [Nelumbo nucifera] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7YV38 | serine/threonine-protein kinase SRPK-like OS=Nelumbo nucifera OX=4432 GN=LOC104587284 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology