Basic Information
Locus ID:
Lb7G34012
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
CTR1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 114538123 | 114558644 | - | Lb7G34012 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 93,085.09 Da | 51.19 | 82.10 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 585 | 833 | 5.40796E-128 | - |
| CDD | cd13999 | STKc_MAP3K-like | 585 | 833 | 5.40796E-128 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 215 | 406 | 1.7E-62 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 215 | 406 | 1.7E-62 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 581 | 833 | 1.1E-69 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 581 | 833 | 1.1E-69 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 560 | 833 | 3.64E-82 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 560 | 833 | 3.64E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 658 | 840 | 2.6E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 572 | 657 | 7.5E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 658 | 840 | 2.6E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 572 | 657 | 7.5E-36 | - |
| SMART | SM00220 | serkin_6 | 579 | 836 | 3.3E-63 | IPR000719 |
| SMART | SM00220 | serkin_6 | 579 | 836 | 3.3E-63 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 579 | 836 | 44.936947 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 579 | 836 | 44.936947 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 585 | 606 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 700 | 712 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 585 | 606 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 700 | 712 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 694 | 712 | 1.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 804 | 826 | 1.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 760 | 782 | 1.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 741 | 751 | 1.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 804 | 826 | 1.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 694 | 712 | 1.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 653 | 666 | 1.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 653 | 666 | 1.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 760 | 782 | 1.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 741 | 751 | 1.4E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_002528586.3 | serine/threonine-protein kinase CTR1 [Ricinus communis] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7B0C7 | Putative serine/threonine-protein kinase CTR1 OS=Davidia involucrata OX=16924 GN=Din_030969 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology