Basic Information
Locus ID:
Lb7G33676
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 99821027 | 99825270 | + | Lb7G33676 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.32 | 24,231.37 Da | 20.59 | 83.67 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01926 | cyclophilin_ABH_like | 56 | 221 | 1.71972E-105 | - |
| CDD | cd01926 | cyclophilin_ABH_like | 56 | 221 | 1.71972E-105 | - |
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 60 | 219 | 4.7E-44 | IPR002130 |
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 60 | 219 | 4.7E-44 | IPR002130 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 52 | 223 | 1.11E-70 | IPR029000 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 52 | 223 | 1.11E-70 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 44 | 226 | 6.7E-80 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 44 | 226 | 6.7E-80 | IPR029000 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 59 | 222 | 44.631207 | IPR002130 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 59 | 222 | 44.631207 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 183 | 198 | 1.2E-37 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 76 | 91 | 1.2E-37 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 170 | 182 | 1.2E-37 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 112 | 124 | 1.2E-37 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 112 | 124 | 1.2E-37 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 155 | 170 | 1.2E-37 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 155 | 170 | 1.2E-37 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 183 | 198 | 1.2E-37 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 170 | 182 | 1.2E-37 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 76 | 91 | 1.2E-37 | IPR002130 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58710.1 | rotamase CYP 7. Encodes cyclophilin ROC7. | 0 |
| RefSeq | XP_011084909.1 | peptidyl-prolyl cis-trans isomerase CYP19-4 [Sesamum indicum] | 0 |
| Q9SP02 | Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana OX=3702 GN=CYP20-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A834Z6V8 | Peptidyl-prolyl cis-trans isomerase OS=Tetracentron sinense OX=13715 GN=HHK36_010743 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology