Basic Information
Locus ID:
Lb7G33613
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 97295131 | 97298320 | + | Lb7G33613 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 98,764.31 Da | 39.85 | 86.57 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 549 | 827 | 4.33897E-87 | - |
| CDD | cd00028 | B_lectin | 53 | 160 | 5.4828E-17 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 549 | 827 | 4.33897E-87 | - |
| CDD | cd00028 | B_lectin | 53 | 160 | 5.4828E-17 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 89 | 175 | 8.4E-16 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 547 | 765 | 1.1E-43 | IPR000719 |
| Pfam | PF00954 | S-locus glycoprotein domain | 270 | 344 | 5.3E-9 | IPR000858 |
| Pfam | PF00069 | Protein kinase domain | 547 | 765 | 1.1E-43 | IPR000719 |
| Pfam | PF01453 | D-mannose binding lectin | 89 | 175 | 8.4E-16 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 270 | 344 | 5.3E-9 | IPR000858 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 522 | 826 | 6.07E-73 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 86 | 162 | 4.19E-17 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 522 | 826 | 6.07E-73 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 86 | 162 | 4.19E-17 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 508 | 618 | 6.8E-29 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 508 | 618 | 6.8E-29 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 31 | 159 | 6.4E-13 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 31 | 159 | 6.4E-13 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 619 | 839 | 8.4E-55 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 619 | 839 | 8.4E-55 | - |
| SMART | SM00108 | blect_4 | 43 | 160 | 3.2E-14 | IPR001480 |
| SMART | SM00108 | blect_4 | 43 | 160 | 3.2E-14 | IPR001480 |
| SMART | SM00220 | serkin_6 | 543 | 825 | 5.0E-22 | IPR000719 |
| SMART | SM00220 | serkin_6 | 543 | 825 | 5.0E-22 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 7 | 872 | 1.2E-214 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 7 | 872 | 1.2E-214 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 35 | 157 | 11.686211 | IPR001480 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 35 | 157 | 11.686211 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 543 | 828 | 35.325825 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 543 | 828 | 35.325825 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 549 | 572 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 676 | 688 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 676 | 688 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 549 | 572 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24080.2 | - | 0 |
| RefSeq | XP_010060008.2 | LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Eucalyptus grandis] | 0 |
| Q9FLV4 | G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana OX=3702 GN=At5g24080 PE=2 SV=1 | 0 | |
| TrEMBL | A0A059DJK6 | Receptor-like serine/threonine-protein kinase OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A02679 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg2233 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_16179 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah018760 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g052920 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg15179 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg26489 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00019974 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl01480, Sgl06645 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000003230, gene:ENSEOMG00000031401 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.3AG0003960 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30202820 |
| Apiaceae | Apium graveolens | 1 | Ag3G02010 |
| Arecaceae | Cocos nucifera | 1 | COCNU_06G003410 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103716031 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.1798.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri17G26594 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G24080.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10003657m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g23240.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g077020.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G1518 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl09G1618, Cgl09G1619 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-11761 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2819 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00010486 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb7G33435, Lb7G33613, Lb7G33615 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG01.1474, evm.TU.LG06.1928, evm.TU.LG14.747 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_4_RagTag.63, evm.TU.Scaffold_4_RagTag.64 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-29277 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-3117 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-2213 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000008l.36 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00001486 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-17631, nbisL1-mrna-2317 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-6331 |
| Salicaceae | Populus euphratica | 3 | populus_peu28138, populus_peu28139, populus_peu29589 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132632001, gene-LOC132639502 |
| Solanaceae | Solanum chilense | 2 | SOLCI003387000, SOLCI004405100 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107013075, gene-LOC107021797 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_10794 |
| Tamaricaceae | Tamarix chinensis | 1 | TC08G1521 |