Basic Information
Locus ID:
Lb7G33483
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Plant transposase (Ptta/En/Spm family)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 87721276 | 87726047 | + | Lb7G33483 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 46,659.05 Da | 49.75 | 66.10 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 231 | 351 | 9.0E-17 | IPR004252 |
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 231 | 351 | 9.0E-17 | IPR004252 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 61 | - | - |
| Coils | Coil | Coil | 364 | 384 | - | - |
| Coils | Coil | Coil | 364 | 384 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039145580.1 | uncharacterized protein LOC120282800 [Dioscorea cayenensis subsp. rotundata] | 0 |
| TrEMBL | A0A2K3L4U5 | Transposase, Ptta/En/Spm, plant OS=Trifolium pratense OX=57577 GN=L195_g029441 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||