halophFGD

Basic Information

Locus ID: Lb7G33435

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: G-type lectin S-receptor-like serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr07	84129317	84132252	+	Lb7G33435

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.96	84,304.19 Da	34.58	86.34	-0.09

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	495	580	3.0E-13	IPR001245
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	495	580	3.0E-13	IPR001245
Pfam	PF00954	S-locus glycoprotein domain	241	308	2.2E-8	IPR000858
Pfam	PF00954	S-locus glycoprotein domain	241	308	2.2E-8	IPR000858
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	470	706	8.4E-35	IPR011009
SUPERFAMILY	SSF51110	alpha-D-mannose-specific plant lectins	76	152	2.36E-9	IPR036426
SUPERFAMILY	SSF51110	alpha-D-mannose-specific plant lectins	76	152	2.36E-9	IPR036426
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	470	706	8.4E-35	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	457	567	5.4E-29	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	457	567	5.4E-29	-
Gene3D	G3DSA:2.90.10.10	-	31	157	5.5E-10	IPR036426
Gene3D	G3DSA:2.90.10.10	-	31	157	5.5E-10	IPR036426
SMART	SM00108	blect_4	43	150	4.4E-6	IPR001480
SMART	SM00108	blect_4	43	150	4.4E-6	IPR001480
PIRSF	PIRSF000641	SRK	7	586	6.6E-96	IPR024171
PIRSF	PIRSF000641	SRK	599	631	9.4E-8	IPR024171
PIRSF	PIRSF000641	SRK	599	631	9.4E-8	IPR024171
PIRSF	PIRSF000641	SRK	7	586	6.6E-96	IPR024171
PIRSF	PIRSF000641	SRK	630	729	3.3E-17	IPR024171
PIRSF	PIRSF000641	SRK	630	729	3.3E-17	IPR024171
ProSiteProfiles	PS50927	Bulb-type lectin domain profile.	35	157	11.315373	IPR001480
ProSiteProfiles	PS50927	Bulb-type lectin domain profile.	35	157	11.315373	IPR001480
ProSiteProfiles	PS50011	Protein kinase domain profile.	492	763	12.753828	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	492	763	12.753828	IPR000719
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	498	521	-	IPR017441
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	498	521	-	IPR017441

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation) GO:0048544 (recognition of pollen)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0004674 (protein serine/threonine kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G24080.2	-
RefSeq	XP_010060008.2	LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Eucalyptus grandis]
Swiss-Prot	Q9FLV4	G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana OX=3702 GN=At5g24080 PE=2 SV=1
TrEMBL	A0A059DJK6	Receptor-like serine/threonine-protein kinase OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A02679 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg2233
Aizoaceae	Mesembryanthemum crystallinum	1	gene_16179
Amaranthaceae	Atriplex hortensis	1	Ah018760
Amaranthaceae	Beta vulgaris	1	BVRB_3g052920
Amaranthaceae	Salicornia bigelovii	1	Sbi_jg15179
Amaranthaceae	Salicornia europaea	1	Seu_jg26489
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00019974
Amaranthaceae	Suaeda glauca	2	Sgl01480, Sgl06645
Amaranthaceae	Chenopodium album	2	gene:ENSEOMG00000003230, gene:ENSEOMG00000031401
Amaranthaceae	Chenopodium quinoa	1	CQ.Regalona.r1.3AG0003960
Anacardiaceae	Pistacia vera	1	pistato.v30202820
Apiaceae	Apium graveolens	1	Ag3G02010
Arecaceae	Cocos nucifera	1	COCNU_06G003410
Arecaceae	Phoenix dactylifera	1	gene-LOC103716031
Asparagaceae	Asparagus officinalis	1	AsparagusV1_05.1798.V1.1
Asteraceae	Flaveria trinervia	1	Ftri17G26594
Brassicaceae	Arabidopsis thaliana	1	AT5G24080.1
Brassicaceae	Eutrema salsugineum	1	Thhalv10003657m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp2g23240.v2.2
Brassicaceae	Brassica nigra	1	BniB02g077020.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq09G1518
Casuarinaceae	Casuarina glauca	2	Cgl09G1618, Cgl09G1619
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-11761
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG01.2819
Plantaginaceae	Plantago ovata	1	Pov_00010486
Plumbaginaceae	Limonium bicolor	3	Lb7G33435, Lb7G33613, Lb7G33615
Portulacaceae	Portulaca oleracea	3	evm.TU.LG01.1474, evm.TU.LG06.1928, evm.TU.LG14.747
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_4_RagTag.63, evm.TU.Scaffold_4_RagTag.64
Rhizophoraceae	Carallia pectinifolia	1	nbisL1-mrna-29277
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-3117
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-2213
Rhizophoraceae	Kandelia candel	1	evm.TU.utg000008l.36
Rhizophoraceae	Kandelia obovata	1	Maker00001486
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-17631, nbisL1-mrna-2317
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-6331
Salicaceae	Populus euphratica	3	populus_peu28138, populus_peu28139, populus_peu29589
Solanaceae	Lycium barbarum	2	gene-LOC132632001, gene-LOC132639502
Solanaceae	Solanum chilense	2	SOLCI003387000, SOLCI004405100
Solanaceae	Solanum pennellii	2	gene-LOC107013075, gene-LOC107021797
Tamaricaceae	Reaumuria soongarica	1	gene_10794
Tamaricaceae	Tamarix chinensis	1	TC08G1521