Basic Information
Locus ID:
Lb7G33200
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Casein Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 65165600 | 65171084 | + | Lb7G33200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 83,376.82 Da | 43.20 | 70.74 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14016 | STKc_CK1 | 178 | 453 | 3.13466E-130 | - |
| CDD | cd14016 | STKc_CK1 | 178 | 453 | 3.13466E-130 | - |
| Pfam | PF00069 | Protein kinase domain | 178 | 465 | 7.1E-17 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 178 | 465 | 7.1E-17 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 178 | 463 | 3.42E-60 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 178 | 463 | 3.42E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 147 | 487 | 1.1E-80 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 147 | 487 | 1.1E-80 | - |
| SMART | SM00220 | serkin_6 | 178 | 476 | 2.9E-12 | IPR000719 |
| SMART | SM00220 | serkin_6 | 178 | 476 | 2.9E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 178 | 476 | 23.552204 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 178 | 476 | 23.552204 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 304 | 316 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 184 | 216 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 304 | 316 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 184 | 216 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 143 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 143 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 122 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13670.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_010257513.1 | PREDICTED: casein kinase 1-like protein HD16 [Nelumbo nucifera] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7ZT66 | casein kinase 1-like protein HD16 OS=Nelumbo nucifera OX=4432 GN=LOC104597586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology