Basic Information
Locus ID:
Lb7G33199
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 64982053 | 64985114 | + | Lb7G33199 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 47,161.61 Da | 41.07 | 101.44 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01545 | Cation efflux family | 127 | 319 | 1.0E-24 | IPR002524 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 324 | 398 | 6.3E-13 | IPR027470 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 324 | 398 | 6.3E-13 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 127 | 319 | 1.0E-24 | IPR002524 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 121 | 320 | 7.32E-37 | IPR027469 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 323 | 399 | 6.41E-17 | IPR036837 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 323 | 399 | 6.41E-17 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 121 | 320 | 7.32E-37 | IPR027469 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 121 | 318 | 5.9E-37 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 321 | 400 | 2.5E-17 | IPR036837 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 321 | 400 | 2.5E-17 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 121 | 318 | 5.9E-37 | IPR027469 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 122 | 400 | 7.2E-35 | IPR002524 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 122 | 400 | 7.2E-35 | IPR002524 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58060.1 | Cation efflux family protein. | 0 |
| RefSeq | XP_021858163.1 | metal tolerance protein 4-like [Spinacia oleracea] | 0 |
| Q10PP8 | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9R5V7 | ZT_dimer domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_103030 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology