Basic Information
Locus ID:
Lb7G32959
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
CSC1-like protein RXW8
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 39661136 | 39666415 | + | Lb7G32959 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.56 | 83,698.29 Da | 51.00 | 98.42 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 56 | 188 | 4.5E-25 | IPR032880 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 424 | 502 | 8.1E-22 | IPR003864 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 56 | 188 | 4.5E-25 | IPR032880 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 424 | 502 | 8.1E-22 | IPR003864 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 723 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 723 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 703 | 723 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 703 | 723 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58520.1 | lipases;hydrolases, acting on ester bonds. | 0 |
| RefSeq | XP_021730373.1 | CSC1-like protein RXW8 isoform X2 [Chenopodium quinoa] | 0 |
| F4IBD7 | CSC1-like protein RXW8 OS=Arabidopsis thaliana OX=3702 GN=RXW8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803N2A2 | CSC1-like protein RXW8 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology