halophFGD

Basic Information

Locus ID: Lb6G32621

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: membrane

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr06	293097044	293104572	+	Lb6G32621

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.84	96,925.12 Da	44.26	105.92	0.24

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF14703	Cytosolic domain of 10TM putative phosphate transporter	189	345	3.4E-25	IPR027815
Pfam	PF13967	Late exocytosis, associated with Golgi transport	6	168	1.5E-37	IPR032880
Pfam	PF02714	Calcium-dependent channel, 7TM region, putative phosphate	360	628	1.0E-70	IPR003864
Pfam	PF13967	Late exocytosis, associated with Golgi transport	6	168	1.5E-37	IPR032880
Pfam	PF02714	Calcium-dependent channel, 7TM region, putative phosphate	360	628	1.0E-70	IPR003864
Pfam	PF14703	Cytosolic domain of 10TM putative phosphate transporter	189	345	3.4E-25	IPR027815
Coils	Coil	Coil	233	253	-	-
Coils	Coil	Coil	233	253	-	-

Gene Ontology

Cellular Component:

GO:0016020 (membrane)

KEGG Pathway

KO Term:

K21989 (calcium permeable stress-gated cation channel)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G01100.1	hypothetical protein 1. unknown protein, has cDNAs and ESTs associated to it
RefSeq	XP_007045993.1	PREDICTED: CSC1-like protein At1g69450 [Theobroma cacao]
Swiss-Prot	Q8GUH7	CSC1-like protein HYP1 OS=Arabidopsis thaliana OX=3702 GN=HYP1 PE=1 SV=1
TrEMBL	A0A061E9Z2	Early-responsive to dehydration stress protein (ERD4) isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_011633 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg11387, jg17627, jg22683, jg40236
Aizoaceae	Mesembryanthemum crystallinum	3	gene_18273, gene_24652, gene_8564
Amaranthaceae	Atriplex hortensis	3	Ah013106, Ah019275, Ah032828
Amaranthaceae	Beta vulgaris	3	BVRB_2g040220, BVRB_2g040450, BVRB_6g153280
Amaranthaceae	Salicornia bigelovii	7	Sbi_jg29720, Sbi_jg29856, Sbi_jg38235, Sbi_jg42989 ... Sbi_jg43241, Sbi_jg43313, Sbi_jg45595
Amaranthaceae	Salicornia europaea	3	Seu_jg11442, Seu_jg18573, Seu_jg18657
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00002094, GOSA_00004322, GOSA_00007049
Amaranthaceae	Suaeda glauca	8	Sgl22835, Sgl22851, Sgl27966, Sgl35670, Sgl41011, Sgl41065 ... Sgl66374, Sgl70709
Amaranthaceae	Chenopodium album	8	gene:ENSEOMG00000000217, gene:ENSEOMG00000002313 ... gene:ENSEOMG00000014421, gene:ENSEOMG00000020190, gene:ENSEOMG00000030221, gene:ENSEOMG00000044244, gene:ENSEOMG00000044355, gene:ENSEOMG00000051206
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.2AG0006620, CQ.Regalona.r1.2BG0006850 ... CQ.Regalona.r1.3AG0000210, CQ.Regalona.r1.6AG0000490, CQ.Regalona.r1.6BG0000480
Anacardiaceae	Pistacia vera	5	pistato.v30042710, pistato.v30193850, pistato.v30194360 ... pistato.v30227400, pistato.v30281660
Apiaceae	Apium graveolens	6	Ag10G02821, Ag2G00462, Ag3G00101, Ag4G00941, Ag4G01876 ... Ag9G00511
Arecaceae	Cocos nucifera	3	COCNU_05G000730, COCNU_06G016940, COCNU_06G019610
Arecaceae	Phoenix dactylifera	3	gene-LOC103700851, gene-LOC103707526, gene-LOC103713672
Asparagaceae	Asparagus officinalis	4	AsparagusV1_03.2134.V1.1, AsparagusV1_03.752.V1.1 ... AsparagusV1_07.3110.V1.1, AsparagusV1_08.1815.V1.1
Asteraceae	Flaveria trinervia	4	Ftri16G02641, Ftri18G25470, Ftri18G30644, Ftri5G29657
Brassicaceae	Arabidopsis thaliana	4	AT1G10090.1, AT1G58520.2, AT1G69450.1, AT3G01100.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10006880m.g.v1.0, Thhalv10018196m.g.v1.0 ... Thhalv10020163m.g.v1.0, Thhalv10023298m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp1g08740.v2.2, Sp2g05100.v2.2, Sp3g01010.v2.2 ... Sp5g24510.v2.2
Brassicaceae	Brassica nigra	6	BniB01g060860.2N, BniB02g059970.2N, BniB03g003720.2N ... BniB03g046800.2N, BniB07g034930.2N, BniB07g045610.2N
Casuarinaceae	Casuarina equisetifolia	4	Ceq03G1246, Ceq07G0185, Ceq08G0319, Ceq08G0320
Casuarinaceae	Casuarina glauca	3	Cgl03G1352, Cgl07G0188, Cgl08G0265
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno01g09500, gene.Cymno01g14680, gene.Cymno14g06680
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate02g10730, gene.Thate02g36620
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-1186
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG02.233, evm.TU.LG03.309, evm.TU.LG06.296 ... evm.TU.LG09.297
Plantaginaceae	Plantago ovata	3	Pov_00025673, Pov_00028001, Pov_00037104
Plumbaginaceae	Limonium bicolor	7	Lb1G02201, Lb4G23357, Lb6G32606, Lb6G32621, Lb7G32959 ... Lb7G32971, Lb7G33032
Poaceae	Echinochloa crus-galli	13	AH01.1435, AH01.758, AH05.3898, AH05.4201, BH01.1208 ... BH01.900, BH05.3950, BH05.4284, BH08.1535, CH01.1263, CH01.918, CH05.4170, CH05.4514
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_3AG0221870, gene-QOZ80_3BG0263370 ... gene-QOZ80_3BG0267040, gene-QOZ80_5AG0395720, gene-QOZ80_5AG0399420, gene-QOZ80_5BG0448130
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.4HG0334050.1, HORVU.MOREX.r3.4HG0338820.1 ... HORVU.MOREX.r3.5HG0420970.1, HORVU.MOREX.r3.5HG0420980.1, HORVU.MOREX.r3.5HG0439090.1
Poaceae	Lolium multiflorum	10	gene-QYE76_000134, gene-QYE76_000137, gene-QYE76_000412 ... gene-QYE76_000416, gene-QYE76_001204, gene-QYE76_026797, gene-QYE76_026839, gene-QYE76_055357, gene-QYE76_062222, gene-QYE76_063118
Poaceae	Oryza coarctata	8	Oco05G020040, Oco05G022300, Oco06G020830, Oco06G023190 ... Oco23G009320, Oco23G011170, Oco24G009050, Oco24G010990
Poaceae	Oryza sativa	4	LOC_Os03g47070.1, LOC_Os03g51620.1, LOC_Os12g39320.1 ... LOC_Os12g43720.1
Poaceae	Paspalum vaginatum	4	gene-BS78_01G097500, gene-BS78_01G128100 ... gene-BS78_08G120400, gene-BS78_08G166900
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0104722, Pt_Chr0104751, Pt_Chr0107451, Pt_Chr0107484 ... Pt_Chr0602158, Pt_Chr0602546, Pt_Chr0704081
Poaceae	Sporobolus alterniflorus	13	Chr01G006470, Chr01G008400, Chr04G018010, Chr04G019850 ... Chr04G027660, Chr06G018600, Chr06G020790, Chr07G026580, Chr08G010630, Chr12G028770, Chr19G007080, Chr27G008050, Chr27G009820
Poaceae	Thinopyrum elongatum	5	Tel4E01G046400, Tel4E01G096700, Tel5E01G028100 ... Tel5E01G028200, Tel5E01G146500
Poaceae	Triticum dicoccoides	9	gene_TRIDC4AG040300, gene_TRIDC4AG044900 ... gene_TRIDC4BG003810, gene_TRIDC4BG004060, gene_TRIDC4BG008850, gene_TRIDC5AG002040, gene_TRIDC5AG010770, gene_TRIDC5BG001850, gene_TRIDC5BG012680
Poaceae	Triticum aestivum	16	TraesCS4A02G257600.1, TraesCS4A02G291700.1 ... TraesCS4B02G022300.1, TraesCS4B02G023400.1, TraesCS4B02G056900.1, TraesCS4D02G020100.2, TraesCS4D02G057200.1, TraesCS5A02G012500.1, TraesCS5A02G012600.2, TraesCS5A02G071400.1, TraesCS5B02G010700.1, TraesCS5B02G010800.2, TraesCS5B02G077400.1, TraesCS5D02G018000.1, TraesCS5D02G018100.1, TraesCS5D02G083600.1
Poaceae	Zea mays	4	Zm00001eb030220_P001, Zm00001eb052100_P001 ... Zm00001eb134200_P002, Zm00001eb215680_P001
Poaceae	Zoysia japonica	3	nbis-gene-15992, nbis-gene-30439, nbis-gene-54160
Poaceae	Zoysia macrostachya	5	Zma_g25256, Zma_g25406, Zma_g26035, Zma_g2904, Zma_g3077
Portulacaceae	Portulaca oleracea	7	evm.TU.LG03.588, evm.TU.LG04.2815, evm.TU.LG12.1142 ... evm.TU.LG12.1492, evm.TU.LG13.435, evm.TU.LG16.842, evm.TU.LG21.134
Posidoniaceae	Posidonia oceanica	3	gene.Posoc03g19930, gene.Posoc03g27390, gene.Posoc06g18700
Rhizophoraceae	Bruguiera sexangula	5	evm.TU.60367.2, evm.TU.60368.1, evm.TU.Scaffold_7_RagTag.856 ... evm.TU.Scaffold_15_RagTag.593, evm.TU.Scaffold_8_RagTag.874
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-19313, nbisL1-mrna-2205, nbisL1-mrna-26765 ... nbisL1-mrna-9360
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-11710, nbisL1-mrna-11746, nbisL1-mrna-14449 ... nbisL1-mrna-1802
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-15776, nbisL1-mrna-20599, nbisL1-mrna-2939
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000001l.300, evm.TU.utg000018l.256 ... evm.TU.utg000019l.170
Rhizophoraceae	Kandelia obovata	4	Maker00001605, Maker00002669, Maker00003460, Maker00010434
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-11363, nbisL1-mrna-11467, nbisL1-mrna-12151 ... nbisL1-mrna-13106
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-10104, nbisL1-mrna-17094, nbisL1-mrna-18257 ... nbisL1-mrna-23484, nbisL1-mrna-25284
Salicaceae	Populus euphratica	4	populus_peu06758, populus_peu09385, populus_peu20652 ... populus_peu32103
Solanaceae	Lycium barbarum	4	gene-LOC132604049, gene-LOC132604050, gene-LOC132623191 ... gene-LOC132627733
Solanaceae	Solanum chilense	3	SOLCI001736500, SOLCI001794400, SOLCI005645200
Solanaceae	Solanum pennellii	3	gene-LOC107007382, gene-LOC107011582, gene-LOC107017267
Tamaricaceae	Reaumuria soongarica	6	STRG.29417_chr10_+, gene_1078, gene_14523, gene_2109 ... gene_3892, gene_6438
Tamaricaceae	Tamarix chinensis	5	TC01G1260, TC01G3027, TC02G0798, TC03G0801, TC04G2734
Zosteraceae	Zostera marina	4	Zosma03g29320.v3.1, Zosma05g18670.v3.1, Zosma06g01970.v3.1 ... Zosma06g22270.v3.1