Basic Information
Locus ID:
Lb6G32346
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Ubiquitin system component Cue protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 282539165 | 282540598 | - | Lb6G32346 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 25,138.79 Da | 79.08 | 80.96 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14279 | CUE | 59 | 91 | 8.45032E-8 | - |
| CDD | cd14279 | CUE | 59 | 91 | 8.45032E-8 | - |
| Pfam | PF02845 | CUE domain | 58 | 91 | 2.8E-6 | IPR003892 |
| Pfam | PF02845 | CUE domain | 58 | 91 | 2.8E-6 | IPR003892 |
| SUPERFAMILY | SSF46934 | UBA-like | 50 | 95 | 2.35E-8 | IPR009060 |
| SUPERFAMILY | SSF46934 | UBA-like | 50 | 95 | 2.35E-8 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 38 | 97 | 9.0E-6 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 38 | 97 | 9.0E-6 | - |
| ProSiteProfiles | PS51140 | CUE domain profile. | 53 | 96 | 12.197241 | IPR003892 |
| ProSiteProfiles | PS51140 | CUE domain profile. | 53 | 96 | 12.197241 | IPR003892 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 140 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 140 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 48 | - | - |
| Coils | Coil | Coil | 183 | 203 | - | - |
| Coils | Coil | Coil | 183 | 203 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G32440.3 | Ubiquitin system component Cue protein. | 0 |
| RefSeq | XP_002285400.1 | PREDICTED: uncharacterized protein LOC100250952 [Vitis vinifera] | 0 |
| TrEMBL | D7TC54 | CUE domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g05730 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology