Basic Information
Locus ID:
Lb6G32200
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ and MATH domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 278325478 | 278328033 | + | Lb6G32200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 43,818.29 Da | 47.37 | 92.53 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 32 | 167 | 1.9237E-20 | IPR002083 |
| CDD | cd00121 | MATH | 32 | 167 | 1.9237E-20 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 193 | 307 | 5.9E-25 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 193 | 307 | 5.9E-25 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 29 | 174 | 7.36E-26 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 182 | 305 | 5.89E-28 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 182 | 305 | 5.89E-28 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 29 | 174 | 7.36E-26 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 172 | 325 | 1.6E-34 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 172 | 325 | 1.6E-34 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 31 | 171 | 8.7E-24 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 31 | 171 | 8.7E-24 | IPR008974 |
| SMART | SM00225 | BTB_4 | 203 | 311 | 9.6E-23 | IPR000210 |
| SMART | SM00225 | BTB_4 | 203 | 311 | 9.6E-23 | IPR000210 |
| SMART | SM00061 | math_3 | 36 | 149 | 2.1E-4 | IPR002083 |
| SMART | SM00061 | math_3 | 36 | 149 | 2.1E-4 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 203 | 266 | 17.851612 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 31 | 166 | 17.782852 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 203 | 266 | 17.851612 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 31 | 166 | 17.782852 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.2 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_034704587.1 | BTB/POZ and MATH domain-containing protein 3 isoform X2 [Vitis riparia] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | F6HNU2 | BTB/POZ and MATH domain-containing protein 3 OS=Vitis vinifera OX=29760 GN=VIT_13s0019g02260 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||