Basic Information
Locus ID:
Lb6G32054
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Ubiquitin system component Cue protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 271688942 | 271707553 | + | Lb6G32054 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 30,161.54 Da | 63.50 | 76.30 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14279 | CUE | 57 | 90 | 5.38643E-8 | - |
| CDD | cd14279 | CUE | 57 | 90 | 5.38643E-8 | - |
| Pfam | PF02845 | CUE domain | 59 | 90 | 4.0E-6 | IPR003892 |
| Pfam | PF02845 | CUE domain | 59 | 90 | 4.0E-6 | IPR003892 |
| SUPERFAMILY | SSF46934 | UBA-like | 49 | 96 | 4.97E-8 | IPR009060 |
| SUPERFAMILY | SSF46934 | UBA-like | 49 | 96 | 4.97E-8 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 46 | 94 | 6.8E-6 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 46 | 94 | 6.8E-6 | - |
| ProSiteProfiles | PS51140 | CUE domain profile. | 52 | 95 | 11.748642 | IPR003892 |
| ProSiteProfiles | PS51140 | CUE domain profile. | 52 | 95 | 11.748642 | IPR003892 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 57 | - | - |
| Coils | Coil | Coil | 179 | 199 | - | - |
| Coils | Coil | Coil | 179 | 199 | - | - |
| Coils | Coil | Coil | 217 | 244 | - | - |
| Coils | Coil | Coil | 217 | 244 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G32440.3 | Ubiquitin system component Cue protein. | 0 |
| RefSeq | XP_021616027.1 | uncharacterized protein LOC110617503 [Manihot esculenta] | 0 |
| TrEMBL | A0A5B6ZZL2 | CUE domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_018419 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology