halophFGD

Basic Information

Locus ID: Lb6G31849

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: ZINC FINGER protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr06	263762788	263771918	+	Lb6G31849

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.49	97,089.15 Da	59.44	74.76	-0.53

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF57667	beta-beta-alpha zinc fingers	522	621	1.64E-7	IPR036236
SUPERFAMILY	SSF54001	Cysteine proteinases	232	373	1.51E-14	IPR038765
SUPERFAMILY	SSF57667	beta-beta-alpha zinc fingers	522	621	1.64E-7	IPR036236
SUPERFAMILY	SSF54001	Cysteine proteinases	232	373	1.51E-14	IPR038765
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	220	390	7.0E-11	-
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	220	390	7.0E-11	-
Gene3D	G3DSA:3.30.160.60	Classic Zinc Finger	579	659	7.0E-7	-
Gene3D	G3DSA:3.30.160.60	Classic Zinc Finger	579	659	7.0E-7	-
Gene3D	G3DSA:3.30.160.60	Classic Zinc Finger	501	575	4.6E-5	-
Gene3D	G3DSA:3.30.160.60	Classic Zinc Finger	501	575	4.6E-5	-
SMART	SM00355	c2h2final6	523	545	0.022	IPR013087
SMART	SM00355	c2h2final6	601	621	200.0	IPR013087
SMART	SM00355	c2h2final6	566	596	100.0	IPR013087
SMART	SM00355	c2h2final6	601	621	200.0	IPR013087
SMART	SM00355	c2h2final6	566	596	100.0	IPR013087
SMART	SM00355	c2h2final6	523	545	0.022	IPR013087
ProSiteProfiles	PS50157	Zinc finger C2H2 type domain profile.	523	545	10.844938	IPR013087
ProSiteProfiles	PS50157	Zinc finger C2H2 type domain profile.	523	545	10.844938	IPR013087
ProSitePatterns	PS00028	Zinc finger C2H2 type domain signature.	525	545	-	IPR013087
ProSitePatterns	PS00028	Zinc finger C2H2 type domain signature.	525	545	-	IPR013087
MobiDBLite	mobidb-lite	consensus disorder prediction	16	49	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	16	51	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	485	504	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	16	49	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	16	51	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	485	504	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT3G45260.1	C2H2-like zinc finger protein.
RefSeq	XP_011089888.1	protein indeterminate-domain 9 [Sesamum indicum]
Swiss-Prot	Q944L3	Zinc finger protein BALDIBIS OS=Arabidopsis thaliana OX=3702 GN=BIB PE=1 SV=1
TrEMBL	A0A6I9U0G3	protein indeterminate-domain 9 OS=Sesamum indicum OX=4182 GN=LOC105170705 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	2	Sgl83028, Sgl83243
Asteraceae	Flaveria trinervia	1	Ftri11G21610
Plumbaginaceae	Limonium bicolor	205	Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... Lb1G00016, Lb1G00025, Lb1G00041, Lb1G00216, Lb1G00446, Lb1G00496, Lb1G00537, Lb1G00838, Lb1G00881, Lb1G01217, Lb1G01250, Lb1G01420, Lb1G01727, Lb1G01739, Lb1G01864, Lb1G02109, Lb1G02190, Lb1G02386, Lb1G02665, Lb1G02901, Lb1G04123, Lb1G04369, Lb1G04498, Lb1G04508, Lb1G04544, Lb1G04801, Lb1G04989, Lb1G05062, Lb1G05705, Lb1G06154, Lb1G06343, Lb1G06536, Lb1G07190, Lb1G07606, Lb1G08079, Lb1G08084, Lb2G08488, Lb2G08848, Lb2G09003, Lb2G09148, Lb2G09151, Lb2G09732, Lb2G10130, Lb2G10257, Lb2G10268, Lb2G10796, Lb2G11162, Lb2G11275, Lb2G11363, Lb2G11364, Lb2G11700, Lb2G11973, Lb2G12024, Lb2G12090, Lb2G12144, Lb2G12148, Lb2G12772, Lb2G14019, Lb2G14433, Lb2G14511, Lb2G14738, Lb2G14769, Lb2G14775, Lb2G14777, Lb2G14779, Lb2G14787, Lb2G14822, Lb2G14863, Lb2G15122, Lb3G15887, Lb3G15944, Lb3G16026, Lb3G16136, Lb3G16486, Lb3G16505, Lb3G16933, Lb3G16974, Lb3G18077, Lb3G18799, Lb3G19247, Lb3G19458, Lb3G19924, Lb3G20000, Lb3G20090, Lb3G20112, Lb3G20377, Lb3G21074, Lb3G21407, Lb4G21885, Lb4G22209, Lb4G22210, Lb4G22510, Lb4G23391, Lb4G23834, Lb4G24203, Lb4G24542, Lb4G24623, Lb4G24702, Lb4G25029, Lb4G25228, Lb4G25239, Lb4G25243, Lb4G25342, Lb4G25423, Lb4G25437, Lb4G25535, Lb4G25571, Lb4G26024, Lb4G26130, Lb4G26162, Lb4G26268, Lb4G26311, Lb4G26371, Lb5G26430, Lb5G26481, Lb5G26498, Lb5G26520, Lb5G26533, Lb5G26534, Lb5G26570, Lb5G26588, Lb5G26681, Lb5G26742, Lb5G26986, Lb5G26989, Lb5G27035, Lb5G27103, Lb5G27152, Lb5G27158, Lb5G27187, Lb5G27188, Lb5G27190, Lb5G27320, Lb5G27668, Lb5G28081, Lb5G28149, Lb5G28249, Lb5G28756, Lb5G28862, Lb5G29295, Lb5G29470, Lb5G29520, Lb5G29610, Lb6G29651, Lb6G30138, Lb6G30357, Lb6G30358, Lb6G30382, Lb6G30561, Lb6G30663, Lb6G30781, Lb6G30811, Lb6G30830, Lb6G30840, Lb6G30846, Lb6G30864, Lb6G30937, Lb6G31137, Lb6G31222, Lb6G31418, Lb6G31748, Lb6G31849, Lb6G32045, Lb6G32399, Lb6G32595, Lb7G32703, Lb7G32755, Lb7G32868, Lb7G33086, Lb7G33313, Lb7G33361, Lb7G33383, Lb7G33437, Lb7G33438, Lb7G33475, Lb7G33577, Lb7G33692, Lb7G33720, Lb7G34424, Lb7G34589, Lb7G34667, Lb7G34684, Lb7G34766, Lb7G34767, Lb7G34778, Lb7G34790, Lb7G35224, Lb7G35252, Lb7G35388, Lb7G35405, Lb7G35411, Lb7G35542, Lb7G35545, Lb8G35638, Lb8G35639, Lb8G35768, Lb8G35859, Lb8G35969, Lb8G36442, Lb8G36575
Poaceae	Lolium multiflorum	4	gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... gene-QYE76_070047