Basic Information
Locus ID:
Lb6G31264
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 223926977 | 223932949 | + | Lb6G31264 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 62,523.68 Da | 50.93 | 77.65 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 266 | 523 | 1.7E-40 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 266 | 523 | 1.7E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 240 | 528 | 4.86E-67 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 240 | 528 | 4.86E-67 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 342 | 546 | 2.6E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 243 | 341 | 2.2E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 243 | 341 | 2.2E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 342 | 546 | 2.6E-47 | - |
| SMART | SM00220 | serkin_6 | 265 | 532 | 6.4E-28 | IPR000719 |
| SMART | SM00220 | serkin_6 | 265 | 532 | 6.4E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 265 | 532 | 35.721577 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 265 | 532 | 35.721577 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 387 | 399 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 387 | 399 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| Coils | Coil | Coil | 156 | 185 | - | - |
| Coils | Coil | Coil | 130 | 150 | - | - |
| Coils | Coil | Coil | 192 | 226 | - | - |
| Coils | Coil | Coil | 130 | 150 | - | - |
| Coils | Coil | Coil | 156 | 185 | - | - |
| Coils | Coil | Coil | 192 | 226 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_019054017.1 | PREDICTED: U-box domain-containing protein 35-like [Nelumbo nucifera] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5B6Z2D4 | Putative U-box domain-containing protein 52 OS=Davidia involucrata OX=16924 GN=Din_007693 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology