Basic Information
Locus ID:
Lb6G31263
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 223892043 | 223895053 | + | Lb6G31263 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 78,033.04 Da | 41.40 | 87.35 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 56 | 95 | 4.3E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 398 | 664 | 3.9E-28 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 147 | 206 | 2.6E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 147 | 206 | 2.6E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 398 | 664 | 3.9E-28 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 56 | 95 | 4.3E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 62 | 240 | 6.05E-28 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 398 | 668 | 4.27E-46 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 62 | 240 | 6.05E-28 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 398 | 668 | 4.27E-46 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 166 | 2.9E-23 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 362 | 469 | 3.9E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 167 | 263 | 2.4E-18 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 470 | 681 | 1.4E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 362 | 469 | 3.9E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 470 | 681 | 1.4E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 166 | 2.9E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 167 | 263 | 2.4E-18 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 394 | 653 | 26.350735 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 394 | 653 | 26.350735 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 674 | 701 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 674 | 701 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_021715870.1 | pollen receptor-like kinase 1 [Chenopodium quinoa] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MET9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology