Basic Information
Locus ID:
Lb6G31063
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 210711177 | 210711883 | - | Lb6G31063 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 18,608.07 Da | 59.14 | 101.95 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 16 | 167 | 1.0E-21 | IPR000490 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 16 | 167 | 1.0E-21 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 17 | 166 | 2.86E-28 | IPR017853 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 17 | 166 | 2.86E-28 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 15 | 171 | 2.0E-43 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 15 | 171 | 2.0E-43 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021850937.1 | glucan endo-1,3-beta-glucosidase 4 [Spinacia oleracea] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RV46 | X8 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_032040 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology