Basic Information
Locus ID:
Lb6G31002
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 204188738 | 204196843 | + | Lb6G31002 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 89,922.52 Da | 27.08 | 95.04 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 315 | 337 | 0.052 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 656 | 813 | 3.7E-29 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 406 | 491 | 2.1E-6 | IPR021720 |
| Pfam | PF11721 | Malectin domain | 503 | 543 | 5.6E-5 | IPR021720 |
| Pfam | PF11721 | Malectin domain | 406 | 491 | 2.1E-6 | IPR021720 |
| Pfam | PF00560 | Leucine Rich Repeat | 315 | 337 | 0.052 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 656 | 813 | 3.7E-29 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 503 | 543 | 5.6E-5 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 78 | 337 | 1.02E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 600 | 808 | 5.19E-55 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 78 | 337 | 1.02E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 600 | 808 | 5.19E-55 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 74 | 276 | 2.0E-48 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 277 | 397 | 3.5E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 586 | 680 | 4.2E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 586 | 680 | 4.2E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 681 | 813 | 3.4E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 74 | 276 | 2.0E-48 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 681 | 813 | 3.4E-37 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 403 | 494 | 1.3E-5 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 403 | 494 | 1.3E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 277 | 397 | 3.5E-25 | IPR032675 |
| SMART | SM00220 | serkin_6 | 614 | 803 | 6.2E-12 | IPR000719 |
| SMART | SM00220 | serkin_6 | 614 | 803 | 6.2E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 614 | 814 | 27.241177 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 614 | 814 | 27.241177 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 708 | 720 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 708 | 720 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53440.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_034678463.1 | probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Vitis riparia] | 0 |
| C0LGG9 | Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2 | 0 | |
| TrEMBL | A0A438J4I1 | Putative LRR receptor-like serine/threonine-protein kinase OS=Vitis vinifera OX=29760 GN=VvCHDp000410_22 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology