halophFGD

Basic Information

Locus ID: Lb6G30840

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: source UniProtKB

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr06	170837729	170844412	+	Lb6G30840

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.04	148,189.58 Da	47.34	69.97	-0.64

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13963	Transposase-associated domain	7	72	1.1E-13	IPR029480
Pfam	PF13952	Domain of unknown function (DUF4216)	519	576	8.8E-13	IPR025312
Pfam	PF13963	Transposase-associated domain	7	72	1.1E-13	IPR029480
Pfam	PF02992	Transposase family tnp2	298	462	2.1E-71	IPR004242
Pfam	PF02992	Transposase family tnp2	298	462	2.1E-71	IPR004242
Pfam	PF13952	Domain of unknown function (DUF4216)	519	576	8.8E-13	IPR025312
SUPERFAMILY	SSF54001	Cysteine proteinases	1135	1254	6.67E-9	IPR038765
SUPERFAMILY	SSF54001	Cysteine proteinases	1135	1254	6.67E-9	IPR038765
MobiDBLite	mobidb-lite	consensus disorder prediction	676	691	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	582	611	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	636	707	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	935	959	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	636	651	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	582	611	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	935	959	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	792	811	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	636	707	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	676	691	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	636	651	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	792	811	-	-
Coils	Coil	Coil	906	926	-	-
Coils	Coil	Coil	906	926	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_023729236.2	uncharacterized protein LOC111876911 [Lactuca sativa]	0
TrEMBL	A0A5N6LJT1	Transposon protein, putative, CACTA, En/Spm sub-class OS=Mikania micrantha OX=192012 GN=E3N88_42025 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	2	Sgl83028, Sgl83243
Asteraceae	Flaveria trinervia	1	Ftri11G21610
Plumbaginaceae	Limonium bicolor	205	Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... Lb1G00016, Lb1G00025, Lb1G00041, Lb1G00216, Lb1G00446, Lb1G00496, Lb1G00537, Lb1G00838, Lb1G00881, Lb1G01217, Lb1G01250, Lb1G01420, Lb1G01727, Lb1G01739, Lb1G01864, Lb1G02109, Lb1G02190, Lb1G02386, Lb1G02665, Lb1G02901, Lb1G04123, Lb1G04369, Lb1G04498, Lb1G04508, Lb1G04544, Lb1G04801, Lb1G04989, Lb1G05062, Lb1G05705, Lb1G06154, Lb1G06343, Lb1G06536, Lb1G07190, Lb1G07606, Lb1G08079, Lb1G08084, Lb2G08488, Lb2G08848, Lb2G09003, Lb2G09148, Lb2G09151, Lb2G09732, Lb2G10130, Lb2G10257, Lb2G10268, Lb2G10796, Lb2G11162, Lb2G11275, Lb2G11363, Lb2G11364, Lb2G11700, Lb2G11973, Lb2G12024, Lb2G12090, Lb2G12144, Lb2G12148, Lb2G12772, Lb2G14019, Lb2G14433, Lb2G14511, Lb2G14738, Lb2G14769, Lb2G14775, Lb2G14777, Lb2G14779, Lb2G14787, Lb2G14822, Lb2G14863, Lb2G15122, Lb3G15887, Lb3G15944, Lb3G16026, Lb3G16136, Lb3G16486, Lb3G16505, Lb3G16933, Lb3G16974, Lb3G18077, Lb3G18799, Lb3G19247, Lb3G19458, Lb3G19924, Lb3G20000, Lb3G20090, Lb3G20112, Lb3G20377, Lb3G21074, Lb3G21407, Lb4G21885, Lb4G22209, Lb4G22210, Lb4G22510, Lb4G23391, Lb4G23834, Lb4G24203, Lb4G24542, Lb4G24623, Lb4G24702, Lb4G25029, Lb4G25228, Lb4G25239, Lb4G25243, Lb4G25342, Lb4G25423, Lb4G25437, Lb4G25535, Lb4G25571, Lb4G26024, Lb4G26130, Lb4G26162, Lb4G26268, Lb4G26311, Lb4G26371, Lb5G26430, Lb5G26481, Lb5G26498, Lb5G26520, Lb5G26533, Lb5G26534, Lb5G26570, Lb5G26588, Lb5G26681, Lb5G26742, Lb5G26986, Lb5G26989, Lb5G27035, Lb5G27103, Lb5G27152, Lb5G27158, Lb5G27187, Lb5G27188, Lb5G27190, Lb5G27320, Lb5G27668, Lb5G28081, Lb5G28149, Lb5G28249, Lb5G28756, Lb5G28862, Lb5G29295, Lb5G29470, Lb5G29520, Lb5G29610, Lb6G29651, Lb6G30138, Lb6G30357, Lb6G30358, Lb6G30382, Lb6G30561, Lb6G30663, Lb6G30781, Lb6G30811, Lb6G30830, Lb6G30840, Lb6G30846, Lb6G30864, Lb6G30937, Lb6G31137, Lb6G31222, Lb6G31418, Lb6G31748, Lb6G31849, Lb6G32045, Lb6G32399, Lb6G32595, Lb7G32703, Lb7G32755, Lb7G32868, Lb7G33086, Lb7G33313, Lb7G33361, Lb7G33383, Lb7G33437, Lb7G33438, Lb7G33475, Lb7G33577, Lb7G33692, Lb7G33720, Lb7G34424, Lb7G34589, Lb7G34667, Lb7G34684, Lb7G34766, Lb7G34767, Lb7G34778, Lb7G34790, Lb7G35224, Lb7G35252, Lb7G35388, Lb7G35405, Lb7G35411, Lb7G35542, Lb7G35545, Lb8G35638, Lb8G35639, Lb8G35768, Lb8G35859, Lb8G35969, Lb8G36442, Lb8G36575
Poaceae	Lolium multiflorum	4	gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... gene-QYE76_070047