halophFGD

Basic Information

Locus ID: Lb6G30830

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: source UniProtKB

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr06	168242353	168250720	-	Lb6G30830

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.78	165,347.83 Da	44.98	72.46	-0.60

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13963	Transposase-associated domain	3	73	1.9E-15	IPR029480
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	1209	1310	4.5E-14	IPR003653
Pfam	PF13960	Domain of unknown function (DUF4218)	444	544	3.0E-34	IPR025452
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	1209	1310	4.5E-14	IPR003653
Pfam	PF02992	Transposase family tnp2	299	386	1.0E-35	IPR004242
Pfam	PF02992	Transposase family tnp2	299	386	1.0E-35	IPR004242
Pfam	PF13963	Transposase-associated domain	3	73	1.9E-15	IPR029480
Pfam	PF13960	Domain of unknown function (DUF4218)	444	544	3.0E-34	IPR025452
SUPERFAMILY	SSF54001	Cysteine proteinases	1135	1311	7.46E-24	IPR038765
SUPERFAMILY	SSF54001	Cysteine proteinases	1135	1311	7.46E-24	IPR038765
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1123	1320	3.9E-21	-
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1123	1320	3.9E-21	-
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	1140	1307	13.078072	IPR003653
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	1140	1307	13.078072	IPR003653
MobiDBLite	mobidb-lite	consensus disorder prediction	563	640	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1324	1359	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1329	1344	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	944	971	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	950	971	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	563	640	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1329	1344	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	950	971	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	944	971	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1324	1359	-	-
Coils	Coil	Coil	912	932	-	-
Coils	Coil	Coil	912	932	-	-

Gene Ontology

Biological Process:

GO:0006508 (proteolysis)

Molecular Function:

GO:0008234 (cysteine-type peptidase activity)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_019159509.1	PREDICTED: uncharacterized protein LOC109156123 [Ipomoea nil]	0
TrEMBL	A0A1S2XQX5	uncharacterized protein LOC101504131 OS=Cicer arietinum OX=3827 GN=LOC101504131 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	2	Sgl83028, Sgl83243
Asteraceae	Flaveria trinervia	1	Ftri11G21610
Plumbaginaceae	Limonium bicolor	205	Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... Lb1G00016, Lb1G00025, Lb1G00041, Lb1G00216, Lb1G00446, Lb1G00496, Lb1G00537, Lb1G00838, Lb1G00881, Lb1G01217, Lb1G01250, Lb1G01420, Lb1G01727, Lb1G01739, Lb1G01864, Lb1G02109, Lb1G02190, Lb1G02386, Lb1G02665, Lb1G02901, Lb1G04123, Lb1G04369, Lb1G04498, Lb1G04508, Lb1G04544, Lb1G04801, Lb1G04989, Lb1G05062, Lb1G05705, Lb1G06154, Lb1G06343, Lb1G06536, Lb1G07190, Lb1G07606, Lb1G08079, Lb1G08084, Lb2G08488, Lb2G08848, Lb2G09003, Lb2G09148, Lb2G09151, Lb2G09732, Lb2G10130, Lb2G10257, Lb2G10268, Lb2G10796, Lb2G11162, Lb2G11275, Lb2G11363, Lb2G11364, Lb2G11700, Lb2G11973, Lb2G12024, Lb2G12090, Lb2G12144, Lb2G12148, Lb2G12772, Lb2G14019, Lb2G14433, Lb2G14511, Lb2G14738, Lb2G14769, Lb2G14775, Lb2G14777, Lb2G14779, Lb2G14787, Lb2G14822, Lb2G14863, Lb2G15122, Lb3G15887, Lb3G15944, Lb3G16026, Lb3G16136, Lb3G16486, Lb3G16505, Lb3G16933, Lb3G16974, Lb3G18077, Lb3G18799, Lb3G19247, Lb3G19458, Lb3G19924, Lb3G20000, Lb3G20090, Lb3G20112, Lb3G20377, Lb3G21074, Lb3G21407, Lb4G21885, Lb4G22209, Lb4G22210, Lb4G22510, Lb4G23391, Lb4G23834, Lb4G24203, Lb4G24542, Lb4G24623, Lb4G24702, Lb4G25029, Lb4G25228, Lb4G25239, Lb4G25243, Lb4G25342, Lb4G25423, Lb4G25437, Lb4G25535, Lb4G25571, Lb4G26024, Lb4G26130, Lb4G26162, Lb4G26268, Lb4G26311, Lb4G26371, Lb5G26430, Lb5G26481, Lb5G26498, Lb5G26520, Lb5G26533, Lb5G26534, Lb5G26570, Lb5G26588, Lb5G26681, Lb5G26742, Lb5G26986, Lb5G26989, Lb5G27035, Lb5G27103, Lb5G27152, Lb5G27158, Lb5G27187, Lb5G27188, Lb5G27190, Lb5G27320, Lb5G27668, Lb5G28081, Lb5G28149, Lb5G28249, Lb5G28756, Lb5G28862, Lb5G29295, Lb5G29470, Lb5G29520, Lb5G29610, Lb6G29651, Lb6G30138, Lb6G30357, Lb6G30358, Lb6G30382, Lb6G30561, Lb6G30663, Lb6G30781, Lb6G30811, Lb6G30830, Lb6G30840, Lb6G30846, Lb6G30864, Lb6G30937, Lb6G31137, Lb6G31222, Lb6G31418, Lb6G31748, Lb6G31849, Lb6G32045, Lb6G32399, Lb6G32595, Lb7G32703, Lb7G32755, Lb7G32868, Lb7G33086, Lb7G33313, Lb7G33361, Lb7G33383, Lb7G33437, Lb7G33438, Lb7G33475, Lb7G33577, Lb7G33692, Lb7G33720, Lb7G34424, Lb7G34589, Lb7G34667, Lb7G34684, Lb7G34766, Lb7G34767, Lb7G34778, Lb7G34790, Lb7G35224, Lb7G35252, Lb7G35388, Lb7G35405, Lb7G35411, Lb7G35542, Lb7G35545, Lb8G35638, Lb8G35639, Lb8G35768, Lb8G35859, Lb8G35969, Lb8G36442, Lb8G36575
Poaceae	Lolium multiflorum	4	gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... gene-QYE76_070047