Basic Information
Locus ID:
Lb6G30709
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 138397980 | 138403228 | - | Lb6G30709 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.17 | 68,608.61 Da | 38.68 | 95.92 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 119 | 179 | 2.5E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 69 | 1.4E-11 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 69 | 1.4E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 303 | 570 | 3.3E-44 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 303 | 570 | 3.3E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 119 | 179 | 2.5E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 193 | 1.9E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 279 | 573 | 1.27E-75 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 279 | 573 | 1.27E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 193 | 1.9E-39 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 379 | 592 | 1.3E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 271 | 378 | 1.1E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 210 | 3.8E-56 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 271 | 378 | 1.1E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 210 | 3.8E-56 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 379 | 592 | 1.3E-63 | - |
| SMART | SM00220 | serkin_6 | 302 | 572 | 8.4E-35 | IPR000719 |
| SMART | SM00220 | serkin_6 | 302 | 572 | 8.4E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 302 | 558 | 35.4813 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 302 | 558 | 35.4813 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 308 | 330 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 308 | 330 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 421 | 433 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 421 | 433 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 590 | 617 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 623 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 590 | 617 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 623 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25560.1 | NSP-interacting kinase 2. | 0 |
| RefSeq | XP_028081117.1 | protein NSP-INTERACTING KINASE 2-like [Camellia sinensis] | 0 |
| Q8RY65 | Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana OX=3702 GN=NIK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4S4DZW0 | Protein kinase domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_010283 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology