Basic Information
Locus ID:
Lb6G30698
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr06 | 137771968 | 137778932 | + | Lb6G30698 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 110,643.86 Da | 32.56 | 92.92 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 696 | 963 | 1.7754E-97 | - |
| CDD | cd14066 | STKc_IRAK | 696 | 963 | 1.7754E-97 | - |
| Pfam | PF00069 | Protein kinase domain | 691 | 957 | 4.9E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 67 | 101 | 0.001 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 691 | 957 | 4.9E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 67 | 101 | 0.001 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 676 | 970 | 3.24E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 85 | 424 | 6.8E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 676 | 970 | 3.24E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 85 | 424 | 6.8E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 664 | 765 | 6.5E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 223 | 323 | 3.5E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 66 | 222 | 1.3E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 766 | 971 | 2.5E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 324 | 472 | 2.4E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 223 | 323 | 3.5E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 66 | 222 | 1.3E-37 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 664 | 765 | 6.5E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 324 | 472 | 2.4E-16 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 766 | 971 | 2.5E-55 | - |
| SMART | SM00220 | serkin_6 | 690 | 964 | 5.6E-34 | IPR000719 |
| SMART | SM00220 | serkin_6 | 690 | 964 | 5.6E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 973 | 38.958263 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 973 | 38.958263 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 810 | 822 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 696 | 718 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 810 | 822 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 696 | 718 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034702161.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Vitis riparia] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S4A9Y9 | probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Nicotiana tabacum OX=4097 GN=LOC107795352 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology